#include <itkUnconstrainedRegionBasedLevelSetFunctionSharedData.h>

Detailed Description

template<typename TInputImage, typename TFeatureImage, typename TSingleData>
class itk::UnconstrainedRegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >

Helper class used to share data in the ScalarChanAndVeseLevelSetFunction.

This class holds cache data used during the computation of the LevelSet updates.

Based on the paper:

   "An active contour model without edges"
    T. Chan and L. Vese.
    In Scale-Space Theories in Computer Vision, pages 141-151, 1999.

Author: Mosaliganti K., Smith B., Gelas A., Gouaillard A., Megason S.

This code was taken from the Insight Journal paper:

"Cell Tracking using Coupled Active Surfaces for Nuclei and Membranes"
https://www.insight-journal.org/browse/publication/642

That is based on the papers:

"Level Set Segmentation: Active Contours without edge"
https://www.insight-journal.org/browse/publication/322

and

"Level set segmentation using coupled active surfaces"
https://www.insight-journal.org/browse/publication/323

Definition at line 58 of file itkUnconstrainedRegionBasedLevelSetFunctionSharedData.h.

Inheritance diagram for itk::UnconstrainedRegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >:

Collaboration diagram for itk::UnconstrainedRegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >:

Public Types
using	ConstPointer = SmartPointer< const Self >

using	FeatureImageType = TFeatureImage

using	InputImageType = TInputImage

using	LevelSetDataType = TSingleData

using	Pointer = SmartPointer< Self >

using	Self = UnconstrainedRegionBasedLevelSetFunctionSharedData

using	Superclass = RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >

Public Types inherited from itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >
using	CentroidVectorType = Vector< float, Self::ImageDimension >

using	ConstPointer = SmartPointer< const Self >

using	FeatureImageConstPointer = typename FeatureImageType::ConstPointer

using	FeatureImagePointer = typename FeatureImageType::Pointer

using	FeatureImageType = TFeatureImage

using	FeatureIndexType = typename FeatureImageType::IndexType

using	FeaturePixelType = typename FeatureImageType::PixelType

using	FeaturePointType = typename FeatureImageType::PointType

using	FeatureRegionType = typename FeatureImageType::RegionType

using	FeatureSizeType = typename FeatureImageType::SizeType

using	FeatureSizeValueType = typename FeatureSizeType::SizeValueType

using	FeatureSpacingType = typename FeatureImageType::SpacingType

using	InputImageConstPointer = typename InputImageType::ConstPointer

using	InputImagePointer = typename InputImageType::Pointer

using	InputImageType = TInputImage

using	InputIndexType = typename InputImageType::IndexType

using	InputIndexValueType = typename InputIndexType::IndexValueType

using	InputPixelType = typename InputImageType::PixelType

using	InputPointType = typename InputImageType::PointType

using	InputRegionType = typename InputImageType::RegionType

using	InputSizeType = typename InputImageType::SizeType

using	InputSizeValueType = typename InputSizeType::SizeValueType

using	InputSpacingType = typename InputImageType::SpacingType

using	KdTreePointer = typename TreeType::Pointer

using	LevelSetDataPointer = typename LevelSetDataType::Pointer

using	LevelSetDataPointerVector = std::vector< LevelSetDataPointer >

using	LevelSetDataPointerVectorIterator = typename LevelSetDataPointerVector::iterator

using	LevelSetDataType = TSingleData

using	ListImageConstPointer = typename ListImageType::ConstPointer

using	ListImagePointer = typename ListImageType::Pointer

using	ListImageType = Image< ListPixelType, Self::ImageDimension >

using	ListIndexType = typename ListImageType::IndexType

using	ListIndexValueType = typename ListIndexType::IndexValueType

using	ListIteratorType = ImageRegionIteratorWithIndex< ListImageType >

using	ListPixelType = std::list< unsigned int >

using	ListPointType = typename ListImageType::PointType

using	ListRegionType = typename ListImageType::RegionType

using	ListSizeType = typename ListImageType::SizeType

using	ListSizeValueType = typename ListSizeType::SizeValueType

using	ListSpacingType = typename ListImageType::SpacingType

using	Pointer = SmartPointer< Self >

using	SampleType = itk::Statistics::ListSample< CentroidVectorType >

using	Self = RegionBasedLevelSetFunctionSharedData

using	Superclass = LightObject

using	TreeGeneratorType = itk::Statistics::KdTreeGenerator< SampleType >

using	TreePointer = typename TreeGeneratorType::Pointer

using	TreeType = typename TreeGeneratorType::KdTreeType

Public Types inherited from itk::LightObject
using	ConstPointer = SmartPointer< const Self >

using	Pointer = SmartPointer< Self >

using	Self = LightObject

Public Member Functions
const char *	GetNameOfClass () const override

void	PopulateListImage () override

Public Member Functions inherited from itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >
void	AllocateListImage (const FeatureImageType *featureImage)

void	CreateHeavisideFunctionOfLevelSetImage (const unsigned int j, const InputImageType *image)

const char *	GetNameOfClass () const override

virtual void	PopulateListImage ()=0

void	SetFunctionCount (const unsigned int n)

void	SetKdTree (KdTreePointer kdtree)

void	SetNumberOfNeighbors (const unsigned int n)

Public Member Functions inherited from itk::LightObject
Pointer	Clone () const

virtual Pointer	CreateAnother () const

virtual void	Delete ()

virtual const char *	GetNameOfClass () const

virtual int	GetReferenceCount () const

void	Print (std::ostream &os, Indent indent=0) const

virtual void	Register () const

virtual void	SetReferenceCount (int)

virtual void	UnRegister () const noexcept

Static Public Member Functions
static Pointer	New ()

Static Public Member Functions inherited from itk::LightObject
static void	BreakOnError ()

static Pointer	New ()

Static Public Attributes
static constexpr unsigned int	ImageDimension = TFeatureImage::ImageDimension

Static Public Attributes inherited from itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >
static constexpr unsigned int	ImageDimension = TFeatureImage::ImageDimension

Protected Member Functions
	UnconstrainedRegionBasedLevelSetFunctionSharedData ()

	~UnconstrainedRegionBasedLevelSetFunctionSharedData () override=default

Protected Member Functions inherited from itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >
	RegionBasedLevelSetFunctionSharedData ()

	~RegionBasedLevelSetFunctionSharedData () override=default

Protected Member Functions inherited from itk::LightObject
virtual LightObject::Pointer	InternalClone () const

	LightObject ()

virtual void	PrintHeader (std::ostream &os, Indent indent) const

virtual void	PrintSelf (std::ostream &os, Indent indent) const

virtual void	PrintTrailer (std::ostream &os, Indent indent) const

virtual	~LightObject ()

Additional Inherited Members
Public Attributes inherited from itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >
unsigned int	m_FunctionCount {}

KdTreePointer	m_KdTree {}

LevelSetDataPointerVector	m_LevelSetDataPointerVector {}

ListImagePointer	m_NearestNeighborListImage {}

unsigned int	m_NumberOfNeighbors { 6 }

Protected Attributes inherited from itk::LightObject
std::atomic< int >	m_ReferenceCount {}

Member Typedef Documentation

◆ ConstPointer

template<typename TInputImage , typename TFeatureImage , typename TSingleData >

using itk::UnconstrainedRegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::ConstPointer = SmartPointer<const Self>

Definition at line 67 of file itkUnconstrainedRegionBasedLevelSetFunctionSharedData.h.

◆ FeatureImageType

template<typename TInputImage , typename TFeatureImage , typename TSingleData >

using itk::UnconstrainedRegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::FeatureImageType = TFeatureImage

Definition at line 88 of file itkUnconstrainedRegionBasedLevelSetFunctionSharedData.h.

◆ InputImageType

template<typename TInputImage , typename TFeatureImage , typename TSingleData >

using itk::UnconstrainedRegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::InputImageType = TInputImage

Definition at line 76 of file itkUnconstrainedRegionBasedLevelSetFunctionSharedData.h.

◆ LevelSetDataType

template<typename TInputImage , typename TFeatureImage , typename TSingleData >

using itk::UnconstrainedRegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::LevelSetDataType = TSingleData

Definition at line 119 of file itkUnconstrainedRegionBasedLevelSetFunctionSharedData.h.

◆ Pointer

template<typename TInputImage , typename TFeatureImage , typename TSingleData >

using itk::UnconstrainedRegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::Pointer = SmartPointer<Self>

Definition at line 66 of file itkUnconstrainedRegionBasedLevelSetFunctionSharedData.h.

◆ Self

template<typename TInputImage , typename TFeatureImage , typename TSingleData >

using itk::UnconstrainedRegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::Self = UnconstrainedRegionBasedLevelSetFunctionSharedData

Definition at line 64 of file itkUnconstrainedRegionBasedLevelSetFunctionSharedData.h.

◆ Superclass

template<typename TInputImage , typename TFeatureImage , typename TSingleData >

using itk::UnconstrainedRegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::Superclass = RegionBasedLevelSetFunctionSharedData<TInputImage, TFeatureImage, TSingleData>

Definition at line 65 of file itkUnconstrainedRegionBasedLevelSetFunctionSharedData.h.

Constructor & Destructor Documentation

◆ UnconstrainedRegionBasedLevelSetFunctionSharedData()

template<typename TInputImage , typename TFeatureImage , typename TSingleData >

itk::UnconstrainedRegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::UnconstrainedRegionBasedLevelSetFunctionSharedData ( )

inlineprotected

Definition at line 137 of file itkUnconstrainedRegionBasedLevelSetFunctionSharedData.h.

◆ ~UnconstrainedRegionBasedLevelSetFunctionSharedData()

template<typename TInputImage , typename TFeatureImage , typename TSingleData >

itk::UnconstrainedRegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::~UnconstrainedRegionBasedLevelSetFunctionSharedData ( )

overrideprotecteddefault

Member Function Documentation

◆ GetNameOfClass()

template<typename TInputImage , typename TFeatureImage , typename TSingleData >

const char * itk::UnconstrainedRegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::GetNameOfClass ( ) const

overridevirtual

Return the name of this class as a string. Used by the object factory (implemented in New()) to instantiate objects of a named type. Also used for debugging and other output information.

Reimplemented from itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >.

◆ New()

template<typename TInputImage , typename TFeatureImage , typename TSingleData >

static Pointer itk::UnconstrainedRegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::New ( )

static

Method for creation through the object factory.

◆ PopulateListImage()

template<typename TInputImage , typename TFeatureImage , typename TSingleData >

void itk::UnconstrainedRegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::PopulateListImage ( )

inlineoverridevirtual

Implements itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >.

Definition at line 125 of file itkUnconstrainedRegionBasedLevelSetFunctionSharedData.h.

References itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::m_FunctionCount, and itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::m_NearestNeighborListImage.

Member Data Documentation

◆ ImageDimension

template<typename TInputImage , typename TFeatureImage , typename TSingleData >

constexpr unsigned int itk::UnconstrainedRegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::ImageDimension = TFeatureImage::ImageDimension

staticconstexpr

Definition at line 69 of file itkUnconstrainedRegionBasedLevelSetFunctionSharedData.h.

The documentation for this class was generated from the following file:

itkUnconstrainedRegionBasedLevelSetFunctionSharedData.h

Detailed Description

Public Types

Public Member Functions

Static Public Member Functions

Static Public Attributes

Protected Member Functions

Additional Inherited Members

Member Typedef Documentation

◆ ConstPointer

◆ FeatureImageType

◆ InputImageType

◆ LevelSetDataType

◆ Pointer

◆ Self

◆ Superclass

Constructor & Destructor Documentation

◆ UnconstrainedRegionBasedLevelSetFunctionSharedData()

◆ ~UnconstrainedRegionBasedLevelSetFunctionSharedData()

Member Function Documentation

◆ GetNameOfClass()

◆ New()

◆ PopulateListImage()

Member Data Documentation

◆ ImageDimension