itk::BinaryMask3DMeshSource< TInputImage, TOutputMesh > Class Template Reference

#include <itkBinaryMask3DMeshSource.h>

Inheritance diagram for itk::BinaryMask3DMeshSource< TInputImage, TOutputMesh >:

[legend]Collaboration diagram for itk::BinaryMask3DMeshSource< TInputImage, TOutputMesh >:

[legend]List of all members.

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Detailed Description

template<class TInputImage, class TOutputMesh>
class itk::BinaryMask3DMeshSource< TInputImage, TOutputMesh >

This class tries to construct a 3D mesh surface based on a binary mask. It can be used to integrate a region-based segmentation method and a deformable model into one hybrid framework.

To construct a mesh, we need to construct elements in a voxel and combine those elements later to form the final mesh. Before go through every voxel in the 3D volume, we first construct 2 look up tables. The index of these 2 tables are the on-off combination of the 8 nodes that form the voxel. So both of these tables has the size of $2^8$ bytes. According to previous work, all those $2^8$ combination of the nodes can be grouped into 16 final combinations. In the first table, we record the final combination that can be transformed from the current combination. The entries of the second table are made up of the transforming sequence that is necessary for the current combination transform to one of the final combinations.

We then go through the 3D volume voxel by voxel, using those two tables we have defined to construct elements within each voxel. We then merge all these mesh elements into one 3D mesh.

PARAMETERS

The ObjectValue parameter is used to identify the object. In most applications, pixels in the object region are assigned to "1", so the default value of ObjectValue is set to "1"

REFERENCE

W. Lorensen and H. Cline, "Marching Cubes: A High Resolution 3D Surface Construction Algorithm", Computer Graphics 21, pp. 163-169, 1987.

INPUT

The input should be a 3D binary image.

Definition at line 78 of file itkBinaryMask3DMeshSource.h.

Public Types
typedef OutputMeshType::CellsContainer	CellsContainer
typedef OutputMeshType::CellsContainerPointer	CellsContainerPointer
typedef OutputMeshType::CellTraits	CellTraits
typedef SmartPointer< const Self >	ConstPointer
typedef DataObject::Pointer	DataObjectPointer
typedef std::vector< DataObjectPointer >	DataObjectPointerArray
typedef CovariantVector< double, 2 >	doubleVector
typedef InputImageType::ConstPointer	InputImageConstPointer
typedef InputImageType::IndexType	InputImageIndexType
typedef ImageRegionConstIterator< InputImageType >	InputImageIterator
typedef InputImageType::PixelType	InputImagePixelType
typedef InputImageType::Pointer	InputImagePointer
typedef InputImageType::RegionType	InputImageRegionType
typedef TInputImage	InputImageType
typedef InputImageType::PixelType	InputPixelType
typedef CovariantVector< int, 2 >	intVector
typedef OutputMeshType::MeshTraits	OMeshTraits
typedef OMeshTraits::PixelType	OPixelType
typedef OutputMeshType::PointType	OPointType
typedef InputImageType::PointType	OriginType
typedef OutputMeshType::Pointer	OutputMeshPointer
typedef TOutputMesh	OutputMeshType
typedef SmartPointer< Self >	Pointer
typedef OutputMeshType::PointsContainer	PointsContainer
typedef OutputMeshType::PointsContainerPointer	PointsContainerPointer
typedef BinaryMask3DMeshSource	Self
typedef InputImageType::SpacingType	SpacingType
typedef ImageToMeshFilter< TInputImage, TOutputMesh >	Superclass
typedef CellInterface< OPixelType, CellTraits >	TCellInterface
typedef TriangleCell< TCellInterface >	TriCell
typedef TriCell::SelfAutoPointer	TriCellAutoPointer
Public Member Functions
virtual void	AbortGenerateDataOff ()
virtual void	AbortGenerateDataOn ()
virtual LightObject::Pointer	CreateAnother () const
virtual void	DebugOff () const
virtual void	DebugOn () const
virtual void	Delete ()
virtual void	EnlargeOutputRequestedRegion (DataObject *)
virtual const bool &	GetAbortGenerateData ()
Command *	GetCommand (unsigned long tag)
bool	GetDebug () const
const InputImageType *	GetInput (unsigned int idx)
DataObjectPointerArray &	GetInputs ()
const MetaDataDictionary &	GetMetaDataDictionary (void) const
MetaDataDictionary &	GetMetaDataDictionary (void)
virtual unsigned long	GetMTime () const
MultiThreader *	GetMultiThreader ()
virtual const char *	GetNameOfClass () const
virtual unsigned long	GetNumberOfCells ()
std::vector< DataObjectPointer >::size_type	GetNumberOfInputs () const
virtual unsigned long	GetNumberOfNodes ()
std::vector< DataObjectPointer >::size_type	GetNumberOfOutputs () const
virtual const int &	GetNumberOfThreads ()
virtual std::vector< DataObjectPointer >::size_type	GetNumberOfValidRequiredInputs () const
OutputMeshType *	GetOutput (unsigned int idx)
OutputMeshType *	GetOutput (void)
Return an array with all the outputs of this process object *This is useful for tracing forward in the pipeline to contruct *graphs etc *DataObjectPointerArray &	GetOutputs ()
virtual const float &	GetProgress ()
virtual int	GetReferenceCount () const
virtual const bool &	GetReleaseDataBeforeUpdateFlag ()
virtual bool	GetReleaseDataFlag () const
virtual void	GraftNthOutput (unsigned int idx, DataObject *output)
****this	GraftOutput (lastFilterInMiniPipeline->GetOutput())
****lastFilterInMiniPipeline	GraftOutput (this->GetOutput())
bool	HasObserver (const EventObject &event) const
void	InvokeEvent (const EventObject &) const
void	InvokeEvent (const EventObject &)
Graft the specified DataObject onto this ProcessObject s output *This method grabs a handle to the specified DataObject s bulk *data to used as its output s own bulk data It also copies the *region	ivars (RequestedRegion, BufferedRegion,*LargestPossibleRegion) and meta-data(Spacing
DataObject::Pointer	MakeOutput (unsigned int idx)
virtual void	Modified () const
virtual void	PrepareOutputs ()
void	Print (std::ostream &os, Indent indent=0) const
virtual void	PropagateRequestedRegion (DataObject *output)
virtual void	Register () const
virtual void	ReleaseDataBeforeUpdateFlagOff ()
virtual void	ReleaseDataBeforeUpdateFlagOn ()
void	ReleaseDataFlagOff ()
void	ReleaseDataFlagOn ()
void	RemoveAllObservers ()
void	RemoveObserver (unsigned long tag)
virtual void	ResetPipeline ()
virtual void	SetAbortGenerateData (bool _arg)
void	SetDebug (bool debugFlag) const
void	SetInput (unsigned int idx, const InputImageType *input)
virtual void	SetInput (const InputImageType *inputImage)
void	SetMetaDataDictionary (const MetaDataDictionary &rhs)
Get Set the number of threads to create when executing *virtual void	SetNumberOfThreads (int _arg)
virtual void	SetObjectValue (InputPixelType _arg)
void	SetOutput (TOutputMesh *output)
virtual void	SetProgress (float _arg)
virtual void	SetReferenceCount (int)
Turn on off the flags to control whether the bulk data belonging *to the outputs of this ProcessObject are released after being *used by a downstream ProcessObject Default value is off Another *options for controlling memory utilization is the *ReleaseDataBeforeUpdateFlag *virtual void	SetReleaseDataFlag (bool flag)
virtual void	UnRegister () const
***lastFilterInMiniPipeline	Update ()
virtual void	UpdateLargestPossibleRegion ()
virtual void	UpdateOutputData (DataObject *output)
virtual void	UpdateOutputInformation ()
void	UpdateProgress (float amount)
Static Public Member Functions
static void	BreakOnError ()
static bool	GetGlobalWarningDisplay ()
static void	GlobalWarningDisplayOff ()
static void	GlobalWarningDisplayOn ()
static Pointer	New ()
This is a global flag that controls whether any warning *or error messages are displayed *static void	SetGlobalWarningDisplay (bool flag)
Public Attributes
Allow people to add remove invoke observers(callbacks) to any ITK *object.This is an implementation of the subject/observer design *pattern.An observer is added by specifying an event to respond to *and an itk unsigned lon	AddObserver )(const EventObject &event, Command *) const
This is a global flag that controls whether any	debug
*endcode **For proper pipeline	execution
Graft the specified DataObject onto this ProcessObject s output *This method grabs a handle to the specified DataObject s bulk *data to used as its output s own bulk data It also copies the *region Origin from the *specified data object into this filter s output data object Most	however
Graft the specified DataObject onto this ProcessObject s output *This method grabs a handle to the specified DataObject s bulk *data to used as its output s own bulk data It also copies the *region Origin from the *specified data object into this filter s output data object Most *	importantly
Protected Member Functions
virtual void	AddInput (DataObject *input)
virtual void	AddOutput (DataObject *output)
	BinaryMask3DMeshSource ()
virtual void	CacheInputReleaseDataFlags ()
void	GenerateData ()
void	GenerateInputRequestedRegion ()
virtual void	GenerateOutputInformation ()
virtual void	GenerateOutputRequestedRegion (DataObject *output)
const DataObject *	GetInput (unsigned int idx) const
virtual const unsigned int &	GetNumberOfRequiredInputs ()
virtual const unsigned int &	GetNumberOfRequiredOutputs ()
const DataObject *	GetOutput (unsigned int idx) const
virtual void	PopBackInput ()
virtual void	PopFrontInput ()
bool	PrintObservers (std::ostream &os, Indent indent) const
void	PrintSelf (std::ostream &os, Indent indent) const
virtual void	PrintTrailer (std::ostream &os, Indent indent) const
virtual void	PropagateResetPipeline ()
Push Pop an input of this process object These methods allow a *filter to model its input vector as a queue or stack These *routines may not be appropriate for all especially *filters with different types of inputs These routines follow *the semantics of STL *virtual void	PushBackInput (const DataObject *input)
virtual void	PushFrontInput (const DataObject *input)
virtual void	ReleaseInputs ()
virtual void	RemoveInput (DataObject *input)
virtual void	RemoveOutput (DataObject *output)
virtual void	RestoreInputReleaseDataFlags ()
Protected methods for setting inputs *Subclasses make use of them for setting input *virtual void	SetNthInput (unsigned int num, DataObject *input)
Protected methods for setting outputs *Subclasses make use of them for getting output *virtual void	SetNthOutput (unsigned int num, DataObject *output)
void	SetNumberOfInputs (unsigned int num)
void	SetNumberOfOutputs (unsigned int num)
virtual void	SetNumberOfRequiredInputs (unsigned int _arg)
virtual void	SetNumberOfRequiredOutputs (unsigned int _arg)
	~BinaryMask3DMeshSource ()
Protected Attributes
Push Pop an input of this process object These methods allow a *filter to model its input vector as a queue or stack These *routines may not be appropriate for all	filters
TimeStamp	m_OutputInformationMTime
int	m_ReferenceCount
SimpleFastMutexLock	m_ReferenceCountLock
bool	m_Updating
Methods invoked by virtual Print() to print information about the object *including superclasses.Typically not called by the user(use Print()*instead) but used in the hierarchical print process to combine the *output of several classes.*/virtual void PrintSelf(std voi	PrintHeader )(std::ostream &os, Indent indent) const

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Member Typedef Documentation

template<class TInputImage, class TOutputMesh> typedef OutputMeshType::CellsContainer itk::BinaryMask3DMeshSource< TInputImage, TOutputMesh >::CellsContainer

Definition at line 105 of file itkBinaryMask3DMeshSource.h.

template<class TInputImage, class TOutputMesh> typedef OutputMeshType::CellsContainerPointer itk::BinaryMask3DMeshSource< TInputImage, TOutputMesh >::CellsContainerPointer

Definition at line 104 of file itkBinaryMask3DMeshSource.h.

template<class TInputImage, class TOutputMesh> typedef OutputMeshType::CellTraits itk::BinaryMask3DMeshSource< TInputImage, TOutputMesh >::CellTraits

Definition at line 101 of file itkBinaryMask3DMeshSource.h.

template<class TInputImage, class TOutputMesh> typedef SmartPointer<const Self> itk::BinaryMask3DMeshSource< TInputImage, TOutputMesh >::ConstPointer

Reimplemented from itk::ImageToMeshFilter< TInputImage, TOutputMesh >. Definition at line 85 of file itkBinaryMask3DMeshSource.h.

template<class TOutputMesh> typedef DataObject::Pointer itk::MeshSource< TOutputMesh >::DataObjectPointer [inherited]

Some convenient typedefs. Reimplemented from itk::ProcessObject. Reimplemented in itk::SpatialObjectToPointSetFilter< TInputSpatialObject, TOutputPointSet >. Definition at line 56 of file itkMeshSource.h.

typedef std::vector<DataObjectPointer> itk::ProcessObject::DataObjectPointerArray [inherited]

STL Array of SmartPointers to DataObjects Definition at line 103 of file itkProcessObject.h.

template<class TInputImage, class TOutputMesh> typedef CovariantVector<double, 2> itk::BinaryMask3DMeshSource< TInputImage, TOutputMesh >::doubleVector

Definition at line 106 of file itkBinaryMask3DMeshSource.h.

template<class TInputImage, class TOutputMesh> typedef InputImageType::ConstPointer itk::BinaryMask3DMeshSource< TInputImage, TOutputMesh >::InputImageConstPointer

Reimplemented from itk::ImageToMeshFilter< TInputImage, TOutputMesh >. Definition at line 118 of file itkBinaryMask3DMeshSource.h.

template<class TInputImage, class TOutputMesh> typedef InputImageType::IndexType itk::BinaryMask3DMeshSource< TInputImage, TOutputMesh >::InputImageIndexType

Type definition for the classified image index type. Definition at line 124 of file itkBinaryMask3DMeshSource.h.

template<class TInputImage, class TOutputMesh> typedef ImageRegionConstIterator< InputImageType > itk::BinaryMask3DMeshSource< TInputImage, TOutputMesh >::InputImageIterator

Definition at line 126 of file itkBinaryMask3DMeshSource.h.

template<class TInputImage, class TOutputMesh> typedef InputImageType::PixelType itk::ImageToMeshFilter< TInputImage, TOutputMesh >::InputImagePixelType [inherited]

Reimplemented in itk::BinaryMaskToNarrowBandPointSetFilter< TInputImage, TOutputMesh >, and itk::ImageToParametricSpaceFilter< TInputImage, TOutputMesh >. Definition at line 56 of file itkImageToMeshFilter.h.

template<class TInputImage, class TOutputMesh> typedef InputImageType::Pointer itk::BinaryMask3DMeshSource< TInputImage, TOutputMesh >::InputImagePointer

Reimplemented from itk::ImageToMeshFilter< TInputImage, TOutputMesh >. Definition at line 117 of file itkBinaryMask3DMeshSource.h.

template<class TInputImage, class TOutputMesh> typedef InputImageType::RegionType itk::ImageToMeshFilter< TInputImage, TOutputMesh >::InputImageRegionType [inherited]

Reimplemented in itk::BinaryMaskToNarrowBandPointSetFilter< TInputImage, TOutputMesh >, and itk::ImageToParametricSpaceFilter< TInputImage, TOutputMesh >. Definition at line 55 of file itkImageToMeshFilter.h.

template<class TInputImage, class TOutputMesh> typedef TInputImage itk::BinaryMask3DMeshSource< TInputImage, TOutputMesh >::InputImageType

Input Image Type Definition. Reimplemented from itk::ImageToMeshFilter< TInputImage, TOutputMesh >. Definition at line 116 of file itkBinaryMask3DMeshSource.h.

template<class TInputImage, class TOutputMesh> typedef InputImageType::PixelType itk::BinaryMask3DMeshSource< TInputImage, TOutputMesh >::InputPixelType

Definition at line 119 of file itkBinaryMask3DMeshSource.h.

template<class TInputImage, class TOutputMesh> typedef CovariantVector<int, 2> itk::BinaryMask3DMeshSource< TInputImage, TOutputMesh >::intVector

Definition at line 107 of file itkBinaryMask3DMeshSource.h.

template<class TInputImage, class TOutputMesh> typedef OutputMeshType::MeshTraits itk::BinaryMask3DMeshSource< TInputImage, TOutputMesh >::OMeshTraits

Definition at line 95 of file itkBinaryMask3DMeshSource.h.

template<class TInputImage, class TOutputMesh> typedef OMeshTraits::PixelType itk::BinaryMask3DMeshSource< TInputImage, TOutputMesh >::OPixelType

Definition at line 97 of file itkBinaryMask3DMeshSource.h.

template<class TInputImage, class TOutputMesh> typedef OutputMeshType::PointType itk::BinaryMask3DMeshSource< TInputImage, TOutputMesh >::OPointType

Definition at line 96 of file itkBinaryMask3DMeshSource.h.

template<class TInputImage, class TOutputMesh> typedef InputImageType::PointType itk::BinaryMask3DMeshSource< TInputImage, TOutputMesh >::OriginType

Definition at line 121 of file itkBinaryMask3DMeshSource.h.

template<class TInputImage, class TOutputMesh> typedef OutputMeshType::Pointer itk::BinaryMask3DMeshSource< TInputImage, TOutputMesh >::OutputMeshPointer

Some convenient typedefs. Reimplemented from itk::ImageToMeshFilter< TInputImage, TOutputMesh >. Definition at line 100 of file itkBinaryMask3DMeshSource.h.

template<class TInputImage, class TOutputMesh> typedef TOutputMesh itk::BinaryMask3DMeshSource< TInputImage, TOutputMesh >::OutputMeshType

Hold on to the type information specified by the template parameters. Reimplemented from itk::ImageToMeshFilter< TInputImage, TOutputMesh >. Definition at line 91 of file itkBinaryMask3DMeshSource.h.

template<class TInputImage, class TOutputMesh> typedef SmartPointer<Self> itk::BinaryMask3DMeshSource< TInputImage, TOutputMesh >::Pointer

Reimplemented from itk::ImageToMeshFilter< TInputImage, TOutputMesh >. Definition at line 84 of file itkBinaryMask3DMeshSource.h.

template<class TInputImage, class TOutputMesh> typedef OutputMeshType::PointsContainer itk::BinaryMask3DMeshSource< TInputImage, TOutputMesh >::PointsContainer

Definition at line 103 of file itkBinaryMask3DMeshSource.h.

template<class TInputImage, class TOutputMesh> typedef OutputMeshType::PointsContainerPointer itk::BinaryMask3DMeshSource< TInputImage, TOutputMesh >::PointsContainerPointer

Definition at line 102 of file itkBinaryMask3DMeshSource.h.

template<class TInputImage, class TOutputMesh> typedef BinaryMask3DMeshSource itk::BinaryMask3DMeshSource< TInputImage, TOutputMesh >::Self

Standard "Self" typedef. Reimplemented from itk::ImageToMeshFilter< TInputImage, TOutputMesh >. Definition at line 82 of file itkBinaryMask3DMeshSource.h.

template<class TInputImage, class TOutputMesh> typedef InputImageType::SpacingType itk::BinaryMask3DMeshSource< TInputImage, TOutputMesh >::SpacingType

Definition at line 120 of file itkBinaryMask3DMeshSource.h.

template<class TInputImage, class TOutputMesh> typedef ImageToMeshFilter< TInputImage, TOutputMesh > itk::BinaryMask3DMeshSource< TInputImage, TOutputMesh >::Superclass

Reimplemented from itk::ImageToMeshFilter< TInputImage, TOutputMesh >. Definition at line 83 of file itkBinaryMask3DMeshSource.h.

template<class TInputImage, class TOutputMesh> typedef CellInterface<OPixelType, CellTraits> itk::BinaryMask3DMeshSource< TInputImage, TOutputMesh >::TCellInterface

Define the triangular cell types which forms the surface of the model and will be used in FEM application. Definition at line 111 of file itkBinaryMask3DMeshSource.h.

template<class TInputImage, class TOutputMesh> typedef TriangleCell<TCellInterface> itk::BinaryMask3DMeshSource< TInputImage, TOutputMesh >::TriCell

Definition at line 112 of file itkBinaryMask3DMeshSource.h.

template<class TInputImage, class TOutputMesh> typedef TriCell::SelfAutoPointer itk::BinaryMask3DMeshSource< TInputImage, TOutputMesh >::TriCellAutoPointer

Definition at line 113 of file itkBinaryMask3DMeshSource.h.

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Constructor & Destructor Documentation

template<class TInputImage, class TOutputMesh> itk::BinaryMask3DMeshSource< TInputImage, TOutputMesh >::BinaryMask3DMeshSource (   )  [protected]

template<class TInputImage, class TOutputMesh> itk::BinaryMask3DMeshSource< TInputImage, TOutputMesh >::~BinaryMask3DMeshSource (   )  [protected]

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Member Function Documentation

virtual void itk::ProcessObject::AbortGenerateDataOff (   )  [virtual, inherited]

virtual void itk::ProcessObject::AbortGenerateDataOn (   )  [virtual, inherited]

Turn on and off the AbortGenerateData flag.

virtual void itk::ProcessObject::AddInput (  DataObject *  input  )  [protected, virtual, inherited]

virtual void itk::ProcessObject::AddOutput (  DataObject *  output  )  [protected, virtual, inherited]

static void itk::LightObject::BreakOnError (   )  [static, inherited]

This method is called when itkExceptionMacro executes. It allows the debugger to break on error.

virtual void itk::ProcessObject::CacheInputReleaseDataFlags (   )  [protected, virtual, inherited]

Cache the state of any ReleaseDataFlag's on the inputs. While the filter is executing, we need to set the ReleaseDataFlag's on the inputs to false in case the current filter is implemented using a mini-pipeline (which will try to release the inputs). After the filter finishes, we restore the state of the ReleaseDataFlag's before the call to ReleaseInputs().

virtual LightObject::Pointer itk::Object::CreateAnother (   )  const [virtual, inherited]

Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class. Reimplemented from itk::LightObject.

virtual void itk::Object::DebugOff (   )  const [virtual, inherited]

Turn debugging output off.

virtual void itk::Object::DebugOn (   )  const [virtual, inherited]

Turn debugging output on.

virtual void itk::LightObject::Delete (   )  [virtual, inherited]

Delete an itk object. This method should always be used to delete an object when the new operator was used to create it. Using the C delete method will not work with reference counting.

virtual void itk::ProcessObject::EnlargeOutputRequestedRegion (  DataObject *   )  [inline, virtual, inherited]

Give the process object a chance to indictate that it will produce more output than it was requested to produce. For example, many imaging filters must compute the entire output at once or can only produce output in complete slices. Such filters cannot handle smaller requested regions. These filters must provide an implementation of this method, setting the output requested region to the size they will produce. By default, a process object does not modify the size of the output requested region. Reimplemented in itk::CurvatureFlowImageFilter< TInputImage, TOutputImage >, itk::ExtensionVelocitiesImageFilter< TLevelSet, TAuxValue, VAuxDimension >, itk::FastMarchingExtensionImageFilter< TLevelSet, TAuxValue, VAuxDimension, TSpeedImage >, itk::FastMarchingImageFilter< TLevelSet, TSpeedImage >, itk::ImagePCAShapeModelEstimator< TInputImage, TOutputImage >, itk::IsoContourDistanceImageFilter< TInputImage, TOutputImage >, itk::IsolatedWatershedImageFilter< TInputImage, TOutputImage >, itk::KLMRegionGrowImageFilter< TInputImage, TOutputImage >, itk::MRFImageFilter< TInputImage, TClassifiedImage >, itk::MultiResolutionPDEDeformableRegistration< TFixedImage, TMovingImage, TDeformationField >, itk::ReinitializeLevelSetImageFilter< TLevelSet >, itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >, itk::WatershedImageFilter< TInputImage >, itk::BlackTopHatImageFilter< TInputImage, TOutputImage, TKernel >, itk::BSplineDecompositionImageFilter< TInputImage, TOutputImage >, itk::ClosingByReconstructionImageFilter< TInputImage, TOutputImage, TKernel >, itk::ConfidenceConnectedImageFilter< TInputImage, TOutputImage >, itk::ConnectedComponentImageFilter< TInputImage, TOutputImage, TMaskImage >, itk::ConnectedThresholdImageFilter< TInputImage, TOutputImage >, itk::ContourDirectedMeanDistanceImageFilter< TInputImage1, TInputImage2 >, itk::ContourMeanDistanceImageFilter< TInputImage1, TInputImage2 >, itk::DirectedHausdorffDistanceImageFilter< TInputImage1, TInputImage2 >, itk::DoubleThresholdImageFilter< TInputImage, TOutputImage >, itk::ExtractOrthogonalSwath2DImageFilter< TImage >, itk::GradientMagnitudeRecursiveGaussianImageFilter< TInputImage, TOutputImage >, itk::GradientRecursiveGaussianImageFilter< TInputImage, TOutputImage >, itk::GrayscaleConnectedClosingImageFilter< TInputImage, TOutputImage >, itk::GrayscaleConnectedOpeningImageFilter< TInputImage, TOutputImage >, itk::GrayscaleFillholeImageFilter< TInputImage, TOutputImage >, itk::GrayscaleGeodesicDilateImageFilter< TInputImage, TOutputImage >, itk::GrayscaleGeodesicErodeImageFilter< TInputImage, TOutputImage >, itk::GrayscaleGrindPeakImageFilter< TInputImage, TOutputImage >, itk::GrayscaleMorphologicalClosingImageFilter< TInputImage, TOutputImage, TKernel >, itk::GrayscaleMorphologicalOpeningImageFilter< TInputImage, TOutputImage, TKernel >, itk::HausdorffDistanceImageFilter< TInputImage1, TInputImage2 >, itk::HConcaveImageFilter< TInputImage, TOutputImage >, itk::HConvexImageFilter< TInputImage, TOutputImage >, itk::HessianRecursiveGaussianImageFilter< TInputImage, TOutputImage >, itk::HMaximaImageFilter< TInputImage, TOutputImage >, itk::HMinimaImageFilter< TInputImage, TOutputImage >, itk::HoughTransform2DCirclesImageFilter< TInputPixelType, TOutputPixelType >, itk::HoughTransform2DLinesImageFilter< TInputPixelType, TOutputPixelType >, itk::ImportImageFilter< TPixel, VImageDimension >, itk::IsolatedConnectedImageFilter< TInputImage, TOutputImage >, itk::LabelStatisticsImageFilter< TInputImage, TLabelImage >, itk::LaplacianRecursiveGaussianImageFilter< TInputImage, TOutputImage >, itk::MinimumMaximumImageFilter< TInputImage >, itk::NeighborhoodConnectedImageFilter< TInputImage, TOutputImage >, itk::OpeningByReconstructionImageFilter< TInputImage, TOutputImage, TKernel >, itk::OrientImageFilter< TInputImage, TOutputImage >, itk::ReconstructionByDilationImageFilter< TInputImage, TOutputImage >, itk::ReconstructionByErosionImageFilter< TInputImage, TOutputImage >, itk::RecursiveSeparableImageFilter< TInputImage, TOutputImage >, itk::RegionOfInterestImageFilter< TInputImage, TOutputImage >, itk::SimilarityIndexImageFilter< TInputImage1, TInputImage2 >, itk::SmoothingRecursiveGaussianImageFilter< TInputImage, TOutputImage >, itk::StatisticsImageFilter< TInputImage >, itk::TobogganImageFilter< TInputImage >, itk::VectorConfidenceConnectedImageFilter< TInputImage, TOutputImage >, itk::WhiteTopHatImageFilter< TInputImage, TOutputImage, TKernel >, itk::ImageFileReader< TOutputImage, ConvertPixelTraits >, itk::ImageSeriesReader< TOutputImage >, and itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage >. Definition at line 222 of file itkProcessObject.h.

template<class TInputImage, class TOutputMesh> void itk::BinaryMask3DMeshSource< TInputImage, TOutputMesh >::GenerateData (  void   )  [protected, virtual]

This method causes the filter to generate its output. Reimplemented from itk::ProcessObject.

template<class TOutputMesh> void itk::MeshSource< TOutputMesh >::GenerateInputRequestedRegion (   )  [protected, virtual, inherited]

Requested region of Mesh is specified as i of N unstructured regions. Since all DataObjects should be able to set the requested region in unstructured form, just copy output->RequestedRegion all inputs. Reimplemented from itk::ProcessObject.

template<class TInputImage, class TOutputMesh> virtual void itk::BinaryMask3DMeshSource< TInputImage, TOutputMesh >::GenerateOutputInformation (   )  [inline, protected, virtual]

Prepare the output Reimplemented from itk::ImageToMeshFilter< TInputImage, TOutputMesh >. Definition at line 143 of file itkBinaryMask3DMeshSource.h.

virtual void itk::ProcessObject::GenerateOutputRequestedRegion (  DataObject *  output  )  [protected, virtual, inherited]

Given one output whose requested region has been set, how should the requested regions for the remaining outputs of the process object be set? By default, all the outputs are set to the same requested region. If a filter needs to produce different requested regions for each output, for instance an image processing filter producing several outputs at different resolutions, then that filter may override this method and set the requested regions appropriatedly. Note that a filter producing multiple outputs of different types is required to override this method. The default implementation can only correctly handle multiple outputs of the same type. Reimplemented in itk::MultiResolutionPyramidImageFilter< TInputImage, TOutputImage >, itk::RecursiveMultiResolutionPyramidImageFilter< TInputImage, TOutputImage >, itk::watershed::BoundaryResolver< TPixelType, TDimension >, itk::watershed::EquivalenceRelabeler< TScalarType, TImageDimension >, itk::watershed::Relabeler< TScalarType, TImageDimension >, itk::watershed::Segmenter< TInputImage >, itk::watershed::SegmentTreeGenerator< TScalarType >, itk::watershed::Relabeler< ScalarType, itkGetStaticConstMacro(ImageDimension)>, and itk::watershed::SegmentTreeGenerator< ScalarType >.

virtual const bool& itk::ProcessObject::GetAbortGenerateData (   )  [virtual, inherited]

Get the AbortGenerateData flag for the process object. Process objects may handle premature termination of execution in different ways.

Command* itk::Object::GetCommand (  unsigned long  tag  )  [inherited]

Get the command associated with the given tag. NOTE: This returns a pointer to a Command, but it is safe to asign this to a Command::Pointer. Since Command inherits from LightObject, at this point in the code, only a pointer or a reference to the Command can be used.

bool itk::Object::GetDebug (   )  const [inherited]

Get the value of the debug flag.

static bool itk::Object::GetGlobalWarningDisplay (   )  [static, inherited]

const DataObject* itk::ProcessObject::GetInput (  unsigned int  idx  )  const [protected, inherited]

template<class TInputImage, class TOutputMesh> const InputImageType* itk::ImageToMeshFilter< TInputImage, TOutputMesh >::GetInput (  unsigned int  idx  )  [inherited]

Get the input image of this process object. Reimplemented from itk::ProcessObject.

DataObjectPointerArray& itk::ProcessObject::GetInputs (   )  [inline, inherited]

Return an array with all the inputs of this process object. This is useful for tracing back in the pipeline to construct graphs etc. Definition at line 108 of file itkProcessObject.h.

const MetaDataDictionary& itk::Object::GetMetaDataDictionary (  void   )  const [inherited]

Returns: A constant reference to this objects MetaDataDictionary.

MetaDataDictionary& itk::Object::GetMetaDataDictionary (  void   )  [inherited]

Returns: A reference to this objects MetaDataDictionary. Warning: This reference may be changed.

virtual unsigned long itk::Object::GetMTime (   )  const [virtual, inherited]

Return this objects modified time. Reimplemented in itk::ImageRegistrationMethod< TFixedImage, TMovingImage >, itk::DeformationFieldSource< TOutputImage >, itk::InverseDeformationFieldImageFilter< TInputImage, TOutputImage >, itk::ResampleImageFilter< TInputImage, TOutputImage, TInterpolatorPrecisionType >, itk::VectorResampleImageFilter< TInputImage, TOutputImage, TInterpolatorPrecisionType >, itk::BoundingBox< TPointIdentifier, VPointDimension, TCoordRep, TPointsContainer >, itk::SceneSpatialObject< SpaceDimension >, and itk::SceneSpatialObject< NDimensions >.

MultiThreader* itk::ProcessObject::GetMultiThreader (   )  [inline, inherited]

Return the multithreader used by this class. Definition at line 281 of file itkProcessObject.h.

template<class TInputImage, class TOutputMesh> virtual const char* itk::BinaryMask3DMeshSource< TInputImage, TOutputMesh >::GetNameOfClass (   )  const [virtual]

Run-time type information (and related methods). Reimplemented from itk::ImageToMeshFilter< TInputImage, TOutputMesh >.

template<class TInputImage, class TOutputMesh> virtual unsigned long itk::BinaryMask3DMeshSource< TInputImage, TOutputMesh >::GetNumberOfCells (   )  [virtual]

std::vector<DataObjectPointer>::size_type itk::ProcessObject::GetNumberOfInputs (   )  const [inline, inherited]

Get the size of the input vector. This is merely the size of the input vector, not the number of inputs that have valid DataObject's assigned. Use GetNumberOfValidRequiredInputs() to determine how many inputs are non-null. Definition at line 115 of file itkProcessObject.h.

template<class TInputImage, class TOutputMesh> virtual unsigned long itk::BinaryMask3DMeshSource< TInputImage, TOutputMesh >::GetNumberOfNodes (   )  [virtual]

std::vector<DataObjectPointer>::size_type itk::ProcessObject::GetNumberOfOutputs (   )  const [inline, inherited]

Definition at line 132 of file itkProcessObject.h.

virtual const unsigned int& itk::ProcessObject::GetNumberOfRequiredInputs (   )  [protected, virtual, inherited]

virtual const unsigned int& itk::ProcessObject::GetNumberOfRequiredOutputs (   )  [protected, virtual, inherited]

virtual const int& itk::ProcessObject::GetNumberOfThreads (   )  [virtual, inherited]

virtual std::vector<DataObjectPointer>::size_type itk::ProcessObject::GetNumberOfValidRequiredInputs (   )  const [virtual, inherited]

Get the number of valid inputs. This is the number of non-null entries in the input vector in the first NumberOfRequiredInputs slots. This method is used to determine whether the necessary required inputs have been set. Subclasses of ProcessObject may override this implementation if the required inputs are not the first slots in input vector. Reimplemented in itk::MultiResolutionPDEDeformableRegistration< TFixedImage, TMovingImage, TDeformationField >, and itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDeformationField >.

const DataObject* itk::ProcessObject::GetOutput (  unsigned int  idx  )  const [protected, inherited]

template<class TOutputMesh> OutputMeshType* itk::MeshSource< TOutputMesh >::GetOutput (  unsigned int  idx  )  [inherited]

Reimplemented from itk::ProcessObject.

template<class TInputImage, class TOutputMesh> OutputMeshType* itk::ImageToMeshFilter< TInputImage, TOutputMesh >::GetOutput (  void   )  [inherited]

Get the output Mesh of this process object. Reimplemented from itk::MeshSource< TOutputMesh >.

Return an array with all the outputs of this process object* This is useful for tracing forward in the pipeline to contruct* graphs etc* DataObjectPointerArray& itk::ProcessObject::GetOutputs (   )  [inline, inherited]

Definition at line 130 of file itkProcessObject.h.

virtual const float& itk::ProcessObject::GetProgress (   )  [virtual, inherited]

Get the execution progress of a process object. The progress is a floating number in [0,1] with 0 meaning no progress and 1 meaning the filter has completed execution.

virtual int itk::LightObject::GetReferenceCount (   )  const [inline, virtual, inherited]

Gets the reference count on this object. Definition at line 98 of file itkLightObject.h.

virtual const bool& itk::ProcessObject::GetReleaseDataBeforeUpdateFlag (   )  [virtual, inherited]

virtual bool itk::ProcessObject::GetReleaseDataFlag (   )  const [virtual, inherited]

static void itk::Object::GlobalWarningDisplayOff (   )  [inline, static, inherited]

Definition at line 100 of file itkObject.h. References itk::Object::SetGlobalWarningDisplay().

static void itk::Object::GlobalWarningDisplayOn (   )  [inline, static, inherited]

Definition at line 98 of file itkObject.h. References itk::Object::SetGlobalWarningDisplay().

template<class TOutputMesh> virtual void itk::MeshSource< TOutputMesh >::GraftNthOutput (  unsigned int  idx, DataObject *  output )  [virtual, inherited]

template<class TOutputMesh> * * * * this itk::MeshSource< TOutputMesh >::GraftOutput (  lastFilterInMiniPipeline->  GetOutput()  )  [inherited]

template<class TOutputMesh> * * * * lastFilterInMiniPipeline itk::MeshSource< TOutputMesh >::GraftOutput (  this->  GetOutput()  )  [inherited]

bool itk::Object::HasObserver (  const EventObject &  event  )  const [inherited]

Return true if an observer is registered for this event.

void itk::Object::InvokeEvent (  const EventObject &   )  const [inherited]

Call Execute on all the Commands observing this event id. The actions triggered by this call doesn't modify this object.

void itk::Object::InvokeEvent (  const EventObject &   )  [inherited]

Call Execute on all the Commands observing this event id.

template<class TOutputMesh> Graft the specified DataObject onto this ProcessObject s output* This method grabs a handle to the specified DataObject s bulk* data to used as its output s own bulk data It also copies the* region itk::MeshSource< TOutputMesh >::ivars (  RequestedRegion  , BufferedRegion  , *  LargestPossibleRegion )  [inherited]

template<class TInputImage, class TOutputMesh> DataObject::Pointer itk::ImageToMeshFilter< TInputImage, TOutputMesh >::MakeOutput (  unsigned int  idx  )  [virtual, inherited]

Create a valid output. Reimplemented from itk::MeshSource< TOutputMesh >.

virtual void itk::Object::Modified (   )  const [virtual, inherited]

Update the modification time for this object. Many filters rely on the modification time to determine if they need to recompute their data. Referenced by itk::MatrixOffsetTransformBase< TScalarType, 3, 3 >::SetCenter(), itk::HistogramAlgorithmBase< TInputHistogram >::SetInputHistogram(), itk::MatrixOffsetTransformBase< TScalarType, 3, 3 >::SetMatrix(), itk::MatrixOffsetTransformBase< TScalarType, 3, 3 >::SetOffset(), itk::ThresholdLabelerImageFilter< TInputImage, TOutputImage >::SetRealThresholds(), itk::CollidingFrontsImageFilter< TInputImage, TOutputImage >::SetSeedPoints1(), itk::CollidingFrontsImageFilter< TInputImage, TOutputImage >::SetSeedPoints2(), itk::NonUniformBSpline< TDimension >::SetSplineOrder(), itk::ThresholdLabelerImageFilter< TInputImage, TOutputImage >::SetThresholds(), itk::Statistics::GoodnessOfFitFunctionBase< typename ComponentType::HistogramType >::SetTotalObservedScale(), and itk::MatrixOffsetTransformBase< TScalarType, 3, 3 >::SetTranslation().

template<class TInputImage, class TOutputMesh> static Pointer itk::BinaryMask3DMeshSource< TInputImage, TOutputMesh >::New (   )  [static]

Method for creation through the object factory. Reimplemented from itk::MeshSource< TOutputMesh >.

virtual void itk::ProcessObject::PopBackInput (   )  [protected, virtual, inherited]

Reimplemented in itk::ImageToImageFilter< TInputImage, TOutputImage >, itk::ImageToImageFilter< TInputImage, TOutputImage >, itk::ImageToImageFilter< TSpeedImage, TLevelSet >, itk::ImageToImageFilter< TDeformationField, TDeformationField >, itk::ImageToImageFilter< TInputImage, TInputImage >, itk::ImageToImageFilter< TInputImage1, Functor::MakeJoin< TInputImage1, TInputImage2 >::ImageType >, itk::ImageToImageFilter< TInputImage, TSparseOutputImage >, itk::ImageToImageFilter< Image< TReferenceImagePixelType, 3 >, Image< DiffusionTensor3D< TTensorPixelType >, 3 > >, itk::ImageToImageFilter< TInputImage, Image< CovariantVector< TDataType,::itk::GetImageDimension< TInputImage >::ImageDimension >,::itk::GetImageDimension< TInputImage >::ImageDimension > >, itk::ImageToImageFilter< TInputImage, BloxBoundaryPointImage< ::itk::GetImageDimension< TInputImage >::ImageDimension > >, itk::ImageToImageFilter< Image< SymmetricSecondRankTensor< double, 3 >, 3 >, Image< TPixel, 3 > >, itk::ImageToImageFilter< TInputImage, Image< unsigned long,::itk::GetImageDimension< TInputImage >::ImageDimension > >, itk::ImageToImageFilter< TSourceImage, BloxBoundaryProfileImage< ::itk::GetImageDimension< TSourceImage >::ImageDimension > >, itk::ImageToImageFilter< TInputImage1, TOutputImage >, itk::ImageToImageFilter< FeatureImageType, ImageType >, itk::ImageToImageFilter< TImageType, TImageType >, itk::ImageToImageFilter< TInputImage, Image< unsigned char,::itk::GetImageDimension< TInputImage >::ImageDimension > >, itk::ImageToImageFilter< BloxBoundaryPointImage< dim >, BloxCoreAtomImage< dim > >, itk::ImageToImageFilter< TInputImage, VectorImage< TProbabilityPrecisionType,::itk::GetImageDimension< TInputImage >::ImageDimension > >, itk::ImageToImageFilter< TInputImage, Image< CovariantVector< TOutputValueType,::itk::GetImageDimension< TInputImage >::ImageDimension >,::itk::GetImageDimension< TInputImage >::ImageDimension > >, itk::ImageToImageFilter< TInputImage, TClassifiedImage >, itk::ImageToImageFilter< TInputImage, TEigenValueImage >, itk::ImageToImageFilter< TInputVectorImage, Image< TLabelsType,::itk::GetImageDimension< TInputVectorImage >::ImageDimension > >, itk::ImageToImageFilter< TInputImage1, TInputImage1 >, itk::ImageToImageFilter< ImageType, ImageType >, itk::ImageToImageFilter< TInputImage, Image< TOutputPixelType,::itk::GetImageDimension< TInputImage >::ImageDimension > >, itk::ImageToImageFilter< TLevelSet, TLevelSet >, itk::ImageToImageFilter< TMovingImage, TFixedImage >, itk::ImageToImageFilter< Image< TPixel, Dimension >, Image< std::complex< TPixel >, Dimension > >, itk::ImageToImageFilter< TImage, TImage >, itk::ImageToImageFilter< Image< std::complex< TPixel >, Dimension >, Image< TPixel, Dimension > >, itk::ImageToImageFilter< TInputImageType, TSparseOutputImageType >, itk::ImageToImageFilter< Image< TInputPixelType, 2 >, Image< TOutputPixelType, 2 > >, itk::ImageToImageFilter< TImage, TImage >, and itk::ImageToImageFilter< ImageType, ImageType >.

virtual void itk::ProcessObject::PopFrontInput (   )  [protected, virtual, inherited]

Reimplemented in itk::ImageToImageFilter< TInputImage, TOutputImage >, itk::ImageToImageFilter< TInputImage, TOutputImage >, itk::ImageToImageFilter< TSpeedImage, TLevelSet >, itk::ImageToImageFilter< TDeformationField, TDeformationField >, itk::ImageToImageFilter< TInputImage, TInputImage >, itk::ImageToImageFilter< TInputImage1, Functor::MakeJoin< TInputImage1, TInputImage2 >::ImageType >, itk::ImageToImageFilter< TInputImage, TSparseOutputImage >, itk::ImageToImageFilter< Image< TReferenceImagePixelType, 3 >, Image< DiffusionTensor3D< TTensorPixelType >, 3 > >, itk::ImageToImageFilter< TInputImage, Image< CovariantVector< TDataType,::itk::GetImageDimension< TInputImage >::ImageDimension >,::itk::GetImageDimension< TInputImage >::ImageDimension > >, itk::ImageToImageFilter< TInputImage, BloxBoundaryPointImage< ::itk::GetImageDimension< TInputImage >::ImageDimension > >, itk::ImageToImageFilter< Image< SymmetricSecondRankTensor< double, 3 >, 3 >, Image< TPixel, 3 > >, itk::ImageToImageFilter< TInputImage, Image< unsigned long,::itk::GetImageDimension< TInputImage >::ImageDimension > >, itk::ImageToImageFilter< TSourceImage, BloxBoundaryProfileImage< ::itk::GetImageDimension< TSourceImage >::ImageDimension > >, itk::ImageToImageFilter< TInputImage1, TOutputImage >, itk::ImageToImageFilter< FeatureImageType, ImageType >, itk::ImageToImageFilter< TImageType, TImageType >, itk::ImageToImageFilter< TInputImage, Image< unsigned char,::itk::GetImageDimension< TInputImage >::ImageDimension > >, itk::ImageToImageFilter< BloxBoundaryPointImage< dim >, BloxCoreAtomImage< dim > >, itk::ImageToImageFilter< TInputImage, VectorImage< TProbabilityPrecisionType,::itk::GetImageDimension< TInputImage >::ImageDimension > >, itk::ImageToImageFilter< TInputImage, Image< CovariantVector< TOutputValueType,::itk::GetImageDimension< TInputImage >::ImageDimension >,::itk::GetImageDimension< TInputImage >::ImageDimension > >, itk::ImageToImageFilter< TInputImage, TClassifiedImage >, itk::ImageToImageFilter< TInputImage, TEigenValueImage >, itk::ImageToImageFilter< TInputVectorImage, Image< TLabelsType,::itk::GetImageDimension< TInputVectorImage >::ImageDimension > >, itk::ImageToImageFilter< TInputImage1, TInputImage1 >, itk::ImageToImageFilter< ImageType, ImageType >, itk::ImageToImageFilter< TInputImage, Image< TOutputPixelType,::itk::GetImageDimension< TInputImage >::ImageDimension > >, itk::ImageToImageFilter< TLevelSet, TLevelSet >, itk::ImageToImageFilter< TMovingImage, TFixedImage >, itk::ImageToImageFilter< Image< TPixel, Dimension >, Image< std::complex< TPixel >, Dimension > >, itk::ImageToImageFilter< TImage, TImage >, itk::ImageToImageFilter< Image< std::complex< TPixel >, Dimension >, Image< TPixel, Dimension > >, itk::ImageToImageFilter< TInputImageType, TSparseOutputImageType >, itk::ImageToImageFilter< Image< TInputPixelType, 2 >, Image< TOutputPixelType, 2 > >, itk::ImageToImageFilter< TImage, TImage >, and itk::ImageToImageFilter< ImageType, ImageType >.

virtual void itk::ProcessObject::PrepareOutputs (   )  [virtual, inherited]

An opportunity to deallocate a ProcessObject's bulk data storage. Some filters may wish to reuse existing bulk data storage to avoid unnecessary deallocation/allocation sequences. The default implementation calls Initialize() on each output. DataObject::Initialize() frees its bulk data by default. Reimplemented in itk::WatershedImageFilter< TInputImage >.

void itk::LightObject::Print (  std::ostream &  os, Indent  indent = 0 )  const [inherited]

Cause the object to print itself out.

bool itk::Object::PrintObservers (  std::ostream &  os, Indent  indent )  const [protected, inherited]

template<class TInputImage, class TOutputMesh> void itk::BinaryMask3DMeshSource< TInputImage, TOutputMesh >::PrintSelf (  std::ostream &  os, Indent  indent )  const [protected, virtual]

Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes. Reimplemented from itk::ImageToMeshFilter< TInputImage, TOutputMesh >.

virtual void itk::LightObject::PrintTrailer (  std::ostream &  os, Indent  indent )  const [protected, virtual, inherited]

virtual void itk::ProcessObject::PropagateRequestedRegion (  DataObject *  output  )  [virtual, inherited]

Send the requested region information back up the pipeline (to the filters that preceed this one). Reimplemented in itk::VTKImageImport< TOutputImage >.

virtual void itk::ProcessObject::PropagateResetPipeline (   )  [protected, virtual, inherited]

Propagate a call to ResetPipeline() up the pipeline. Called only from DataObject.

Push Pop an input of this process object These methods allow a* filter to model its input vector as a queue or stack These* routines may not be appropriate for all especially* filters with different types of inputs These routines follow* the semantics of STL* virtual void itk::ProcessObject::PushBackInput (  const DataObject *  input  )  [protected, virtual, inherited]

Reimplemented in itk::ImageToImageFilter< TInputImage, TOutputImage >, itk::ImageToImageFilter< TInputImage, TOutputImage >, itk::ImageToImageFilter< TSpeedImage, TLevelSet >, itk::ImageToImageFilter< TDeformationField, TDeformationField >, itk::ImageToImageFilter< TInputImage, TInputImage >, itk::ImageToImageFilter< TInputImage1, Functor::MakeJoin< TInputImage1, TInputImage2 >::ImageType >, itk::ImageToImageFilter< TInputImage, TSparseOutputImage >, itk::ImageToImageFilter< Image< TReferenceImagePixelType, 3 >, Image< DiffusionTensor3D< TTensorPixelType >, 3 > >, itk::ImageToImageFilter< TInputImage, Image< CovariantVector< TDataType,::itk::GetImageDimension< TInputImage >::ImageDimension >,::itk::GetImageDimension< TInputImage >::ImageDimension > >, itk::ImageToImageFilter< TInputImage, BloxBoundaryPointImage< ::itk::GetImageDimension< TInputImage >::ImageDimension > >, itk::ImageToImageFilter< Image< SymmetricSecondRankTensor< double, 3 >, 3 >, Image< TPixel, 3 > >, itk::ImageToImageFilter< TInputImage, Image< unsigned long,::itk::GetImageDimension< TInputImage >::ImageDimension > >, itk::ImageToImageFilter< TSourceImage, BloxBoundaryProfileImage< ::itk::GetImageDimension< TSourceImage >::ImageDimension > >, itk::ImageToImageFilter< TInputImage1, TOutputImage >, itk::ImageToImageFilter< FeatureImageType, ImageType >, itk::ImageToImageFilter< TImageType, TImageType >, itk::ImageToImageFilter< TInputImage, Image< unsigned char,::itk::GetImageDimension< TInputImage >::ImageDimension > >, itk::ImageToImageFilter< BloxBoundaryPointImage< dim >, BloxCoreAtomImage< dim > >, itk::ImageToImageFilter< TInputImage, VectorImage< TProbabilityPrecisionType,::itk::GetImageDimension< TInputImage >::ImageDimension > >, itk::ImageToImageFilter< TInputImage, Image< CovariantVector< TOutputValueType,::itk::GetImageDimension< TInputImage >::ImageDimension >,::itk::GetImageDimension< TInputImage >::ImageDimension > >, itk::ImageToImageFilter< TInputImage, TClassifiedImage >, itk::ImageToImageFilter< TInputImage, TEigenValueImage >, itk::ImageToImageFilter< TInputVectorImage, Image< TLabelsType,::itk::GetImageDimension< TInputVectorImage >::ImageDimension > >, itk::ImageToImageFilter< TInputImage1, TInputImage1 >, itk::ImageToImageFilter< ImageType, ImageType >, itk::ImageToImageFilter< TInputImage, Image< TOutputPixelType,::itk::GetImageDimension< TInputImage >::ImageDimension > >, itk::ImageToImageFilter< TLevelSet, TLevelSet >, itk::ImageToImageFilter< TMovingImage, TFixedImage >, itk::ImageToImageFilter< Image< TPixel, Dimension >, Image< std::complex< TPixel >, Dimension > >, itk::ImageToImageFilter< TImage, TImage >, itk::ImageToImageFilter< Image< std::complex< TPixel >, Dimension >, Image< TPixel, Dimension > >, itk::ImageToImageFilter< TInputImageType, TSparseOutputImageType >, itk::ImageToImageFilter< Image< TInputPixelType, 2 >, Image< TOutputPixelType, 2 > >, itk::ImageToImageFilter< TImage, TImage >, and itk::ImageToImageFilter< ImageType, ImageType >.

virtual void itk::ProcessObject::PushFrontInput (  const DataObject *  input  )  [protected, virtual, inherited]

Reimplemented in itk::ImageToImageFilter< TInputImage, TOutputImage >, itk::ImageToImageFilter< TInputImage, TOutputImage >, itk::ImageToImageFilter< TSpeedImage, TLevelSet >, itk::ImageToImageFilter< TDeformationField, TDeformationField >, itk::ImageToImageFilter< TInputImage, TInputImage >, itk::ImageToImageFilter< TInputImage1, Functor::MakeJoin< TInputImage1, TInputImage2 >::ImageType >, itk::ImageToImageFilter< TInputImage, TSparseOutputImage >, itk::ImageToImageFilter< Image< TReferenceImagePixelType, 3 >, Image< DiffusionTensor3D< TTensorPixelType >, 3 > >, itk::ImageToImageFilter< TInputImage, Image< CovariantVector< TDataType,::itk::GetImageDimension< TInputImage >::ImageDimension >,::itk::GetImageDimension< TInputImage >::ImageDimension > >, itk::ImageToImageFilter< TInputImage, BloxBoundaryPointImage< ::itk::GetImageDimension< TInputImage >::ImageDimension > >, itk::ImageToImageFilter< Image< SymmetricSecondRankTensor< double, 3 >, 3 >, Image< TPixel, 3 > >, itk::ImageToImageFilter< TInputImage, Image< unsigned long,::itk::GetImageDimension< TInputImage >::ImageDimension > >, itk::ImageToImageFilter< TSourceImage, BloxBoundaryProfileImage< ::itk::GetImageDimension< TSourceImage >::ImageDimension > >, itk::ImageToImageFilter< TInputImage1, TOutputImage >, itk::ImageToImageFilter< FeatureImageType, ImageType >, itk::ImageToImageFilter< TImageType, TImageType >, itk::ImageToImageFilter< TInputImage, Image< unsigned char,::itk::GetImageDimension< TInputImage >::ImageDimension > >, itk::ImageToImageFilter< BloxBoundaryPointImage< dim >, BloxCoreAtomImage< dim > >, itk::ImageToImageFilter< TInputImage, VectorImage< TProbabilityPrecisionType,::itk::GetImageDimension< TInputImage >::ImageDimension > >, itk::ImageToImageFilter< TInputImage, Image< CovariantVector< TOutputValueType,::itk::GetImageDimension< TInputImage >::ImageDimension >,::itk::GetImageDimension< TInputImage >::ImageDimension > >, itk::ImageToImageFilter< TInputImage, TClassifiedImage >, itk::ImageToImageFilter< TInputImage, TEigenValueImage >, itk::ImageToImageFilter< TInputVectorImage, Image< TLabelsType,::itk::GetImageDimension< TInputVectorImage >::ImageDimension > >, itk::ImageToImageFilter< TInputImage1, TInputImage1 >, itk::ImageToImageFilter< ImageType, ImageType >, itk::ImageToImageFilter< TInputImage, Image< TOutputPixelType,::itk::GetImageDimension< TInputImage >::ImageDimension > >, itk::ImageToImageFilter< TLevelSet, TLevelSet >, itk::ImageToImageFilter< TMovingImage, TFixedImage >, itk::ImageToImageFilter< Image< TPixel, Dimension >, Image< std::complex< TPixel >, Dimension > >, itk::ImageToImageFilter< TImage, TImage >, itk::ImageToImageFilter< Image< std::complex< TPixel >, Dimension >, Image< TPixel, Dimension > >, itk::ImageToImageFilter< TInputImageType, TSparseOutputImageType >, itk::ImageToImageFilter< Image< TInputPixelType, 2 >, Image< TOutputPixelType, 2 > >, itk::ImageToImageFilter< TImage, TImage >, and itk::ImageToImageFilter< ImageType, ImageType >.

virtual void itk::Object::Register (   )  const [virtual, inherited]

Increase the reference count (mark as used by another object). Reimplemented from itk::LightObject.

virtual void itk::ProcessObject::ReleaseDataBeforeUpdateFlagOff (   )  [virtual, inherited]

virtual void itk::ProcessObject::ReleaseDataBeforeUpdateFlagOn (   )  [virtual, inherited]

void itk::ProcessObject::ReleaseDataFlagOff (   )  [inline, inherited]

Definition at line 254 of file itkProcessObject.h.

void itk::ProcessObject::ReleaseDataFlagOn (   )  [inline, inherited]

Definition at line 253 of file itkProcessObject.h.

virtual void itk::ProcessObject::ReleaseInputs (   )  [protected, virtual, inherited]

A filter may need to release its input's bulk data after it has finished calculating a new output. The filter may need to release the inputs because the user has turned on the ReleaseDataFlag or it may need to release the inputs because the filter is an "in place" filter and it has overwritten its input with its output data. The implementation here simply checks the ReleaseDataFlag of the inputs. InPlaceImageFilter overrides this method so release the input it has overwritten. See also: InPlaceImageFilter::ReleaseInputs() Reimplemented in itk::InPlaceImageFilter< TInputImage, TOutputImage >, itk::InPlaceImageFilter< TInputImage, TOutputImage >, itk::InPlaceImageFilter< TDeformationField, TDeformationField >, itk::InPlaceImageFilter< TInputImage >, itk::InPlaceImageFilter< TInputImage, TSparseOutputImage >, itk::InPlaceImageFilter< TInputImage1, TOutputImage >, itk::InPlaceImageFilter< TInputImage, Image< TOutputPixelType,::itk::GetImageDimension< TInputImage >::ImageDimension > >, itk::InPlaceImageFilter< FeatureImageType, ImageType >, itk::InPlaceImageFilter< TInputImage1, Functor::MakeJoin< TInputImage1, TInputImage2 >::ImageType >, itk::InPlaceImageFilter< TInputImageType, TSparseOutputImageType >, and itk::InPlaceImageFilter< TImage, TImage >.

void itk::Object::RemoveAllObservers (   )  [inherited]

Remove all observers .

virtual void itk::ProcessObject::RemoveInput (  DataObject *  input  )  [protected, virtual, inherited]

void itk::Object::RemoveObserver (  unsigned long  tag  )  [inherited]

Remove the observer with this tag value.

virtual void itk::ProcessObject::RemoveOutput (  DataObject *  output  )  [protected, virtual, inherited]

virtual void itk::ProcessObject::ResetPipeline (   )  [virtual, inherited]

Reset the pipeline. If an exception is thrown during an Update(), the pipeline may be in an inconsistent state. This method clears the internal state of the pipeline so Update() can be called.

virtual void itk::ProcessObject::RestoreInputReleaseDataFlags (   )  [protected, virtual, inherited]

Restore the cached input ReleaseDataFlags.

virtual void itk::ProcessObject::SetAbortGenerateData (  bool  _arg  )  [virtual, inherited]

Set the AbortGenerateData flag for the process object. Process objects may handle premature termination of execution in different ways.

void itk::Object::SetDebug (  bool  debugFlag  )  const [inherited]

Set the value of the debug flag. A non-zero value turns debugging on.

This is a global flag that controls whether any warning* or error messages are displayed* static void itk::Object::SetGlobalWarningDisplay (  bool  flag  )  [static, inherited]

Referenced by itk::Object::GlobalWarningDisplayOff(), and itk::Object::GlobalWarningDisplayOn().

template<class TInputImage, class TOutputMesh> void itk::ImageToMeshFilter< TInputImage, TOutputMesh >::SetInput (  unsigned int  idx, const InputImageType *  input )  [inherited]

Set the input image of this process object.

template<class TInputImage, class TOutputMesh> virtual void itk::BinaryMask3DMeshSource< TInputImage, TOutputMesh >::SetInput (  const InputImageType *  inputImage  )  [virtual]

accept the input image

void itk::Object::SetMetaDataDictionary (  const MetaDataDictionary &  rhs  )  [inherited]

Returns: Set the MetaDataDictionary

Protected methods for setting inputs* Subclasses make use of them for setting input* virtual void itk::ProcessObject::SetNthInput (  unsigned int  num, DataObject *  input )  [protected, virtual, inherited]

Referenced by itk::watershed::BoundaryResolver< TPixelType, TDimension >::SetBoundaryA(), itk::watershed::BoundaryResolver< TPixelType, TDimension >::SetBoundaryB(), itk::watershed::EquivalenceRelabeler< TScalarType, TImageDimension >::SetEquivalencyTable(), itk::WatershedImageFilter< TInputImage >::SetInput(), itk::watershed::SegmentTreeGenerator< ScalarType >::SetInputEquivalencyTable(), itk::watershed::Segmenter< TInputImage >::SetInputImage(), itk::watershed::Relabeler< ScalarType, itkGetStaticConstMacro(ImageDimension)>::SetInputImage(), itk::watershed::EquivalenceRelabeler< TScalarType, TImageDimension >::SetInputImage(), itk::watershed::SegmentTreeGenerator< ScalarType >::SetInputSegmentTable(), itk::watershed::Relabeler< ScalarType, itkGetStaticConstMacro(ImageDimension)>::SetInputSegmentTree(), itk::ResampleImageFilter< TInputImage, TOutputImage, TInterpolatorPrecisionType >::SetReferenceImage(), itk::DiffusionTensor3DReconstructionImageFilter< TReferenceImagePixelType, TGradientImagePixelType, TTensorPixelType >::SetReferenceImage(), and itk::ChangeInformationImageFilter< TInputImage >::SetReferenceImage().

Protected methods for setting outputs* Subclasses make use of them for getting output* virtual void itk::ProcessObject::SetNthOutput (  unsigned int  num, DataObject *  output )  [protected, virtual, inherited]

Referenced by itk::watershed::BoundaryResolver< TPixelType, TDimension >::BoundaryResolver(), itk::watershed::EquivalenceRelabeler< TScalarType, TImageDimension >::EquivalenceRelabeler(), itk::watershed::Segmenter< TInputImage >::SetBoundary(), itk::watershed::BoundaryResolver< TPixelType, TDimension >::SetEquivalencyTable(), itk::watershed::Segmenter< TInputImage >::SetOutputImage(), itk::watershed::Relabeler< ScalarType, itkGetStaticConstMacro(ImageDimension)>::SetOutputImage(), itk::watershed::EquivalenceRelabeler< TScalarType, TImageDimension >::SetOutputImage(), and itk::watershed::Segmenter< TInputImage >::SetSegmentTable().

void itk::ProcessObject::SetNumberOfInputs (  unsigned int  num  )  [protected, inherited]

Called to allocate the input array. Copies old inputs.

void itk::ProcessObject::SetNumberOfOutputs (  unsigned int  num  )  [protected, inherited]

Called to allocate the output array. Copies old outputs.

virtual void itk::ProcessObject::SetNumberOfRequiredInputs (  unsigned int  _arg  )  [protected, virtual, inherited]

virtual void itk::ProcessObject::SetNumberOfRequiredOutputs (  unsigned int  _arg  )  [protected, virtual, inherited]

Get Set the number of threads to create when executing* virtual void itk::ProcessObject::SetNumberOfThreads (  int  _arg  )  [virtual, inherited]

template<class TInputImage, class TOutputMesh> virtual void itk::BinaryMask3DMeshSource< TInputImage, TOutputMesh >::SetObjectValue (  InputPixelType  _arg  )  [virtual]

template<class TOutputMesh> void itk::MeshSource< TOutputMesh >::SetOutput (  TOutputMesh *  output  )  [inherited]

Set the mesh output of this process object. This call is slated to be removed from ITK. You should GraftOutput() and possible DataObject::DisconnectPipeline() to properly change the output.

virtual void itk::ProcessObject::SetProgress (  float  _arg  )  [virtual, inherited]

Set the execution progress of a process object. The progress is a floating number in [0,1] with 0 meaning no progress and 1 meaning the filter has completed execution. The ProgressEvent is NOT invoked.

virtual void itk::Object::SetReferenceCount (  int   )  [virtual, inherited]

Sets the reference count (use with care) Reimplemented from itk::LightObject.

Turn on off the flags to control whether the bulk data belonging* to the outputs of this ProcessObject are released after being* used by a downstream ProcessObject Default value is off Another* options for controlling memory utilization is the* ReleaseDataBeforeUpdateFlag* virtual void itk::ProcessObject::SetReleaseDataFlag (  bool  flag  )  [virtual, inherited]

virtual void itk::Object::UnRegister (   )  const [virtual, inherited]

Decrease the reference count (release by another object). Reimplemented from itk::LightObject.

template<class TOutputMesh> * * * lastFilterInMiniPipeline itk::MeshSource< TOutputMesh >::Update (   )  [virtual, inherited]

Bring this filter up-to-date. Update() checks modified times against last execution times, and re-executes objects if necessary. A side effect of this method is that the whole pipeline may execute in order to bring this filter up-to-date. This method updates the currently prescribed requested region. If no requested region has been set on the output, then the requested region will be set to the largest possible region. Once the requested region is set, Update() will make sure the specified requested region is up-to-date. This is a confusing side effect to users who are just calling Update() on a filter. A first call to Update() will cause the largest possible region to be updated. A second call to Update() will update that same region. If a modification to the upstream pipeline cause a filter to have a different largest possible region, this second call to Update() will not cause the output requested region to be reset to the new largest possible region. Instead, the output requested region will be the same as the last time Update() was called. To have a filter always to produce its largest possible region, users should call UpdateLargestPossibleRegion() instead. Reimplemented from itk::ProcessObject.

virtual void itk::ProcessObject::UpdateLargestPossibleRegion (   )  [virtual, inherited]

Like Update(), but sets the output requested region to the largest possible region for the output. This is the method users should call if they want the entire dataset to be processed. If a user wants to update the same output region as a previous call to Update() or a previous call to UpdateLargestPossibleRegion(), then they should call the method Update().

virtual void itk::ProcessObject::UpdateOutputData (  DataObject *  output  )  [virtual, inherited]

Actually generate new output Reimplemented in itk::StreamingImageFilter< TInputImage, TOutputImage >.

virtual void itk::ProcessObject::UpdateOutputInformation (   )  [virtual, inherited]

Update the information decribing the output data. This method transverses up the pipeline gathering modified time information. On the way back down the pipeline, this method calls GenerateOutputInformation() to set any necessary information about the output data objects. For instance, a filter that shrinks an image will need to provide an implementation for GenerateOutputInformation() that changes the spacing of the pixels. Such filters should call their superclass' implementation of GenerateOutputInformation prior to changing the information values they need (i.e. GenerateOutputInformation() should call Superclass::GenerateOutputInformation() prior to changing the information. Reimplemented in itk::watershed::Segmenter< TInputImage >, and itk::VTKImageImport< TOutputImage >.

void itk::ProcessObject::UpdateProgress (  float  amount  )  [inherited]

Update the progress of the process object. Sets the Progress ivar to amount and invokes any observers for the ProgressEvent. The parameter amount should be in [0,1] and is the cumulative (not incremental) progress.

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Member Data Documentation

Allow people to add remove invoke observers (callbacks) to any ITK * object. This is an implementation of the subject/observer design * pattern. An observer is added by specifying an event to respond to * and an itk unsigned lon itk::Object::AddObserver)(const EventObject &event, Command *) const [inherited]

This is a global flag that controls whether any itk::Object::debug [inherited]

Definition at line 94 of file itkObject.h.

template<class TOutputMesh> * endcode* * For proper pipeline itk::MeshSource< TOutputMesh >::execution [inherited]

Definition at line 100 of file itkMeshSource.h.

Push Pop an input of this process object These methods allow a* filter to model its input vector as a queue or stack These* routines may not be appropriate for all itk::ProcessObject::filters [protected, inherited]

Reimplemented in itk::ImageToImageFilter< TInputImage, TOutputImage >, itk::ImageToImageFilter< TInputImage, TOutputImage >, itk::ImageToImageFilter< TSpeedImage, TLevelSet >, itk::ImageToImageFilter< TDeformationField, TDeformationField >, itk::ImageToImageFilter< TInputImage, TInputImage >, itk::ImageToImageFilter< TInputImage1, Functor::MakeJoin< TInputImage1, TInputImage2 >::ImageType >, itk::ImageToImageFilter< TInputImage, TSparseOutputImage >, itk::ImageToImageFilter< Image< TReferenceImagePixelType, 3 >, Image< DiffusionTensor3D< TTensorPixelType >, 3 > >, itk::ImageToImageFilter< TInputImage, Image< CovariantVector< TDataType,::itk::GetImageDimension< TInputImage >::ImageDimension >,::itk::GetImageDimension< TInputImage >::ImageDimension > >, itk::ImageToImageFilter< TInputImage, BloxBoundaryPointImage< ::itk::GetImageDimension< TInputImage >::ImageDimension > >, itk::ImageToImageFilter< Image< SymmetricSecondRankTensor< double, 3 >, 3 >, Image< TPixel, 3 > >, itk::ImageToImageFilter< TInputImage, Image< unsigned long,::itk::GetImageDimension< TInputImage >::ImageDimension > >, itk::ImageToImageFilter< TSourceImage, BloxBoundaryProfileImage< ::itk::GetImageDimension< TSourceImage >::ImageDimension > >, itk::ImageToImageFilter< TInputImage1, TOutputImage >, itk::ImageToImageFilter< FeatureImageType, ImageType >, itk::ImageToImageFilter< TImageType, TImageType >, itk::ImageToImageFilter< TInputImage, Image< unsigned char,::itk::GetImageDimension< TInputImage >::ImageDimension > >, itk::ImageToImageFilter< BloxBoundaryPointImage< dim >, BloxCoreAtomImage< dim > >, itk::ImageToImageFilter< TInputImage, VectorImage< TProbabilityPrecisionType,::itk::GetImageDimension< TInputImage >::ImageDimension > >, itk::ImageToImageFilter< TInputImage, Image< CovariantVector< TOutputValueType,::itk::GetImageDimension< TInputImage >::ImageDimension >,::itk::GetImageDimension< TInputImage >::ImageDimension > >, itk::ImageToImageFilter< TInputImage, TClassifiedImage >, itk::ImageToImageFilter< TInputImage, TEigenValueImage >, itk::ImageToImageFilter< TInputVectorImage, Image< TLabelsType,::itk::GetImageDimension< TInputVectorImage >::ImageDimension > >, itk::ImageToImageFilter< TInputImage1, TInputImage1 >, itk::ImageToImageFilter< ImageType, ImageType >, itk::ImageToImageFilter< TInputImage, Image< TOutputPixelType,::itk::GetImageDimension< TInputImage >::ImageDimension > >, itk::ImageToImageFilter< TLevelSet, TLevelSet >, itk::ImageToImageFilter< TMovingImage, TFixedImage >, itk::ImageToImageFilter< Image< TPixel, Dimension >, Image< std::complex< TPixel >, Dimension > >, itk::ImageToImageFilter< TImage, TImage >, itk::ImageToImageFilter< Image< std::complex< TPixel >, Dimension >, Image< TPixel, Dimension > >, itk::ImageToImageFilter< TInputImageType, TSparseOutputImageType >, itk::ImageToImageFilter< Image< TInputPixelType, 2 >, Image< TOutputPixelType, 2 > >, itk::ImageToImageFilter< TImage, TImage >, and itk::ImageToImageFilter< ImageType, ImageType >. Definition at line 303 of file itkProcessObject.h.

template<class TOutputMesh> Graft the specified DataObject onto this ProcessObject s output* This method grabs a handle to the specified DataObject s bulk* data to used as its output s own bulk data It also copies the* region Origin from the* specified data object into this filter s output data object Most itk::MeshSource< TOutputMesh >::however [inherited]

Definition at line 79 of file itkMeshSource.h.

template<class TOutputMesh> Graft the specified DataObject onto this ProcessObject s output* This method grabs a handle to the specified DataObject s bulk* data to used as its output s own bulk data It also copies the* region Origin from the* specified data object into this filter s output data object Most* itk::MeshSource< TOutputMesh >::importantly [inherited]

Definition at line 79 of file itkMeshSource.h.

TimeStamp itk::ProcessObject::m_OutputInformationMTime [protected, inherited]

Time when GenerateOutputInformation was last called. Definition at line 428 of file itkProcessObject.h.

int itk::LightObject::m_ReferenceCount [mutable, protected, inherited]

Number of uses of this object by other objects. Definition at line 119 of file itkLightObject.h.

SimpleFastMutexLock itk::LightObject::m_ReferenceCountLock [mutable, protected, inherited]

Mutex lock to protect modification to the reference count Definition at line 122 of file itkLightObject.h.

bool itk::ProcessObject::m_Updating [protected, inherited]

This flag indicates when the pipeline is executing. It prevents infinite recursion when pipelines have loops. Definition at line 425 of file itkProcessObject.h.

Methods invoked by virtual Print () to print information about the object * including superclasses. Typically not called by the user (use Print() * instead) but used in the hierarchical print process to combine the * output of several classes. */ virtual void PrintSelf(std voi itk::LightObject::PrintHeader)(std::ostream &os, Indent indent) const [protected, inherited]

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The documentation for this class was generated from the following file:

• itkBinaryMask3DMeshSource.h

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