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ITK
4.5.0
Insight Segmentation and Registration Toolkit
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ITK
4.5.0
Insight Segmentation and Registration Toolkit
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#include <itkObjectToObjectOptimizerBase.h>
Inheritance diagram for itk::ObjectToObjectOptimizerBaseTemplate< TInternalComputationValueType >: Collaboration diagram for itk::ObjectToObjectOptimizerBaseTemplate< TInternalComputationValueType >:Abstract base for object-to-object optimizers.
The goal of this optimizer hierarchy is to work with metrics of any type, i.e. working with any kind of object, such as image or point-set.
Transform parameters are not manipulated directly. Instead, the optimizer retrieves the metric derivative from the metric, modifies the derivative as required, then passes it back to the metric as an update. The metric then processes it as appropriate, typically by passing it to its transform that is being optimized.
SetScales() allows setting of a per-local-parameter scaling array. The gradient of each local parameter is divided by the corresponding scale. If unset, the m_Scales array will be initialized to all 1's. Note that when used with transforms with local support, these scales correspond to each local parameter, and not to each parameter. For example, in a DisplacementFieldTransform of dimensionality N, the Scales is size N, with each element corresponding to a dimension within the transform's displacement field, and is applied to each vector in the displacement field.
SetWeights() allows setting of a per-local-parameter weighting array. If unset, the weights are treated as identity. Weights are multiplied by the gradient at the same time scaling is applied. Weights are different than scales, and may be used, for example, to easily mask out a particular parameter during optimzation to hold it constant. Or they may be used to apply another kind of prior knowledge.
Threading of some optimizer operations may be handled within derived classes, for example in GradientDescentOptimizer.
Definition at line 67 of file itkObjectToObjectOptimizerBase.h.
Public Types | |
| typedef SmartPointer< const Self > | ConstPointer |
| typedef MetricType::MeasureType | MeasureType |
| typedef ObjectToObjectMetricBaseTemplate < TInternalComputationValueType > | MetricType |
| typedef MetricType::Pointer | MetricTypePointer |
| typedef MetricType::NumberOfParametersType | NumberOfParametersType |
| typedef OptimizerParameters < TInternalComputationValueType > | ParametersType |
| typedef SmartPointer< Self > | Pointer |
| typedef OptimizerParameters < TInternalComputationValueType > | ScalesType |
| typedef ObjectToObjectOptimizerBaseTemplate | Self |
| typedef Object | Superclass |
| Public Types inherited from itk::Object | |
| typedef SmartPointer< const Self > | ConstPointer |
| typedef SmartPointer< Self > | Pointer |
| typedef Object | Self |
| typedef LightObject | Superclass |
| Public Types inherited from itk::LightObject | |
| typedef SmartPointer< const Self > | ConstPointer |
| typedef SmartPointer< Self > | Pointer |
| typedef LightObject | Self |
Public Member Functions | |
| virtual const MeasureType & | GetCurrentMetricValue () |
| virtual const ParametersType & | GetCurrentPosition () const |
| virtual const char * | GetNameOfClass () const |
| virtual const ThreadIdType & | GetNumberOfThreads () |
| virtual const ScalesType & | GetScales () |
| virtual const bool & | GetScalesAreIdentity () |
| virtual const MeasureType & | GetValue () const |
| virtual const ScalesType & | GetWeights () |
| virtual const bool & | GetWeightsAreIdentity () |
| virtual void | SetNumberOfThreads (ThreadIdType number) |
| virtual void | SetScales (ScalesType _arg) |
| virtual void | SetWeights (ScalesType _arg) |
| virtual void | StartOptimization (bool doOnlyInitialization=false) |
| virtual void | SetMetric (MetricType *_arg) |
| virtual MetricType * | GetModifiableMetric () |
| virtual const MetricType * | GetMetric () const |
| Public Member Functions inherited from itk::Object | |
| unsigned long | AddObserver (const EventObject &event, Command *) |
| unsigned long | AddObserver (const EventObject &event, Command *) const |
| virtual LightObject::Pointer | CreateAnother () const |
| virtual void | DebugOff () const |
| virtual void | DebugOn () const |
| Command * | GetCommand (unsigned long tag) |
| bool | GetDebug () const |
| MetaDataDictionary & | GetMetaDataDictionary (void) |
| const MetaDataDictionary & | GetMetaDataDictionary (void) const |
| virtual ModifiedTimeType | GetMTime () const |
| virtual const TimeStamp & | GetTimeStamp () const |
| bool | HasObserver (const EventObject &event) const |
| void | InvokeEvent (const EventObject &) |
| void | InvokeEvent (const EventObject &) const |
| virtual void | Modified () const |
| virtual void | Register () const |
| void | RemoveAllObservers () |
| void | RemoveObserver (unsigned long tag) |
| void | SetDebug (bool debugFlag) const |
| void | SetMetaDataDictionary (const MetaDataDictionary &rhs) |
| virtual void | SetReferenceCount (int) |
| virtual void | UnRegister () const |
| virtual void | SetObjectName (std::string _arg) |
| virtual const std::string & | GetObjectName () |
| Public Member Functions inherited from itk::LightObject | |
| virtual void | Delete () |
| virtual int | GetReferenceCount () const |
| itkCloneMacro (Self) | |
| void | Print (std::ostream &os, Indent indent=0) const |
Protected Member Functions | |
| virtual void | PrintSelf (std::ostream &os, Indent indent) const |
| ObjectToObjectOptimizerBaseTemplate () | |
| virtual | ~ObjectToObjectOptimizerBaseTemplate () |
| Protected Member Functions inherited from itk::Object | |
| Object () | |
| bool | PrintObservers (std::ostream &os, Indent indent) const |
| virtual void | SetTimeStamp (const TimeStamp &time) |
| virtual | ~Object () |
| Protected Member Functions inherited from itk::LightObject | |
| virtual LightObject::Pointer | InternalClone () const |
| LightObject () | |
| virtual void | PrintHeader (std::ostream &os, Indent indent) const |
| virtual void | PrintTrailer (std::ostream &os, Indent indent) const |
| virtual | ~LightObject () |
Protected Attributes | |
| MeasureType | m_CurrentMetricValue |
| MetricTypePointer | m_Metric |
| ThreadIdType | m_NumberOfThreads |
| ScalesType | m_Scales |
| bool | m_ScalesAreIdentity |
| ScalesType | m_Weights |
| bool | m_WeightsAreIdentity |
| Protected Attributes inherited from itk::LightObject | |
| InternalReferenceCountType | m_ReferenceCount |
| SimpleFastMutexLock | m_ReferenceCountLock |
Private Member Functions | |
| ObjectToObjectOptimizerBaseTemplate (const Self &) | |
| void | operator= (const Self &) |
Additional Inherited Members | |
| Static Public Member Functions inherited from itk::Object | |
| static bool | GetGlobalWarningDisplay () |
| static void | GlobalWarningDisplayOff () |
| static void | GlobalWarningDisplayOn () |
| static Pointer | New () |
| static void | SetGlobalWarningDisplay (bool flag) |
| Static Public Member Functions inherited from itk::LightObject | |
| static void | BreakOnError () |
| static Pointer | New () |
| Protected Types inherited from itk::LightObject | |
| typedef int | InternalReferenceCountType |
| typedef SmartPointer< const Self > itk::ObjectToObjectOptimizerBaseTemplate< TInternalComputationValueType >::ConstPointer |
Definition at line 74 of file itkObjectToObjectOptimizerBase.h.
| typedef MetricType::MeasureType itk::ObjectToObjectOptimizerBaseTemplate< TInternalComputationValueType >::MeasureType |
Measure type
Definition at line 93 of file itkObjectToObjectOptimizerBase.h.
| typedef ObjectToObjectMetricBaseTemplate< TInternalComputationValueType > itk::ObjectToObjectOptimizerBaseTemplate< TInternalComputationValueType >::MetricType |
Metric function type
Definition at line 86 of file itkObjectToObjectOptimizerBase.h.
| typedef MetricType::Pointer itk::ObjectToObjectOptimizerBaseTemplate< TInternalComputationValueType >::MetricTypePointer |
Definition at line 87 of file itkObjectToObjectOptimizerBase.h.
| typedef MetricType::NumberOfParametersType itk::ObjectToObjectOptimizerBaseTemplate< TInternalComputationValueType >::NumberOfParametersType |
Number of parameters type
Definition at line 90 of file itkObjectToObjectOptimizerBase.h.
| typedef OptimizerParameters< TInternalComputationValueType > itk::ObjectToObjectOptimizerBaseTemplate< TInternalComputationValueType >::ParametersType |
Parameters type.
Definition at line 83 of file itkObjectToObjectOptimizerBase.h.
| typedef SmartPointer< Self > itk::ObjectToObjectOptimizerBaseTemplate< TInternalComputationValueType >::Pointer |
Definition at line 73 of file itkObjectToObjectOptimizerBase.h.
| typedef OptimizerParameters< TInternalComputationValueType > itk::ObjectToObjectOptimizerBaseTemplate< TInternalComputationValueType >::ScalesType |
Scale type.
Definition at line 77 of file itkObjectToObjectOptimizerBase.h.
| typedef ObjectToObjectOptimizerBaseTemplate itk::ObjectToObjectOptimizerBaseTemplate< TInternalComputationValueType >::Self |
Standard class typedefs.
Definition at line 71 of file itkObjectToObjectOptimizerBase.h.
| typedef Object itk::ObjectToObjectOptimizerBaseTemplate< TInternalComputationValueType >::Superclass |
Definition at line 72 of file itkObjectToObjectOptimizerBase.h.
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Default constructor
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Default constructor
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Accessor for metric value. Returns the value stored in m_CurrentMetricValue from the most recent call to evaluate the metric.
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Get a reference to the current position of the optimization. This returns the parameters from the assigned metric, since the optimizer itself does not store a position.
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Accessors for Metric
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Accessors for Metric
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Run-time type information (and related methods).
Reimplemented from itk::Object.
Reimplemented in itk::GradientDescentOptimizerv4Template< TInternalComputationValueType >, itk::QuasiNewtonOptimizerv4Template< TInternalComputationValueType >, itk::GradientDescentLineSearchOptimizerv4Template< TInternalComputationValueType >, itk::ConjugateGradientLineSearchOptimizerv4Template< TInternalComputationValueType >, itk::MultiGradientOptimizerv4Template< TInternalComputationValueType >, itk::GradientDescentOptimizerBasev4Template< TInternalComputationValueType >, and itk::MultiStartOptimizerv4Template< TInternalComputationValueType >.
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Get the number of threads set to be used.
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Get current parameters scaling.
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Get whether scales are identity. Cannot be set
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Deprecated accessor for currently stored metric value for use by classes that support both v4 and v3 optimizers.
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Get current parameters weights. This will return an empty array when weights have not been set by user.
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Get whether weights are identity. Cannot be set
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Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.
Reimplemented from itk::Object.
Reimplemented in itk::GradientDescentOptimizerv4Template< TInternalComputationValueType >, itk::QuasiNewtonOptimizerv4Template< TInternalComputationValueType >, itk::GradientDescentOptimizerBasev4Template< TInternalComputationValueType >, itk::MultiStartOptimizerv4Template< TInternalComputationValueType >, itk::MultiGradientOptimizerv4Template< TInternalComputationValueType >, itk::GradientDescentLineSearchOptimizerv4Template< TInternalComputationValueType >, and itk::ConjugateGradientLineSearchOptimizerv4Template< TInternalComputationValueType >.
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Accessors for Metric
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Set the number of threads to use when threading. The default is the global default number of threads returned from itkMultiThreader.
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Set current parameters scaling.
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Set current parameters weights.
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Run the optimization.
| doOnlyInitialization | This is false by default. It should only be set to true for special cases when the class should be initialized to perform optimization, but no optimization should be run. For example, itkMultiGradientOptimizerv4 needs to do this. |
Reimplemented in itk::GradientDescentOptimizerv4Template< TInternalComputationValueType >, itk::MultiStartOptimizerv4Template< TInternalComputationValueType >, itk::MultiGradientOptimizerv4Template< TInternalComputationValueType >, itk::QuasiNewtonOptimizerv4Template< TInternalComputationValueType >, and itk::ConjugateGradientLineSearchOptimizerv4Template< TInternalComputationValueType >.
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Metric measure value at a given iteration, as most recently evaluated.
Definition at line 164 of file itkObjectToObjectOptimizerBase.h.
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Definition at line 160 of file itkObjectToObjectOptimizerBase.h.
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Definition at line 161 of file itkObjectToObjectOptimizerBase.h.
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Scales. Size is expected to be == metric->GetNumberOfLocalParameters(). See the main documentation for more details.
Definition at line 168 of file itkObjectToObjectOptimizerBase.h.
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Flag to avoid unnecessary arithmetic when scales are identity.
Definition at line 177 of file itkObjectToObjectOptimizerBase.h.
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Parameter weights. These are applied to local parameters, at the same time as scales. See main documentation. If not set by user, the array remains empty and treated as identity to simplify the reuse of an optimizer with transforms with different numbers of parameters.
Definition at line 174 of file itkObjectToObjectOptimizerBase.h.
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Flag to avoid unnecessary arithmetic when weights are identity.
Definition at line 180 of file itkObjectToObjectOptimizerBase.h.
1.8.5
