#include <itkMahalanobisDistanceThresholdImageFunction.h>
Inheritance diagram for itk::MahalanobisDistanceThresholdImageFunction< TInputImage, TCoordRep >:


This ImageFunction returns true if the pixel value of a vector image has a Mahalanobis distance below the value specided by the threshold. The Mahalanobis distance is computed with the MahalanobisDistanceMembershipFunction class which has to be initialized with the mean an covariance to be used. This class is intended to be used only with images whose pixel type is a vector (array).
The input image is set via method SetInputImage().
Methods Evaluate, EvaluateAtIndex and EvaluateAtContinuousIndex respectively evaluate the function at an geometric point, image index and continuous image index.
Definition at line 47 of file itkMahalanobisDistanceThresholdImageFunction.h.
Public Types | |
| typedef SmartPointer< const Self > | ConstPointer |
| typedef Superclass::ContinuousIndexType | ContinuousIndexType |
| typedef TCoordRep | CoordRepType |
| typedef vnl_matrix< double > | CovarianceMatrixType |
| typedef Superclass::IndexType | IndexType |
| typedef InputImageType::ConstPointer | InputImageConstPointer |
| typedef Superclass::InputImageType | InputImageType |
| typedef InputImageType::PixelType | InputPixelType |
| typedef Point< TCoordRep, ::itk::GetImageDimension< TInputImage >::ImageDimension > | InputType |
| typedef vnl_vector< double > | MeanVectorType |
| typedef bool | OutputType |
| typedef TInputImage::PixelType | PixelType |
| typedef SmartPointer< Self > | Pointer |
| typedef Superclass::PointType | PointType |
| typedef MahalanobisDistanceThresholdImageFunction | Self |
| typedef ImageFunction< TInputImage, bool, TCoordRep > | Superclass |
Public Member Functions | |
| Convert continuous index to nearest index *void | ConvertContinuousIndexToNearestIndex (const ContinuousIndexType &cindex, IndexType &index) const |
| void | ConvertPointToContinousIndex (const PointType &point, ContinuousIndexType &cindex) const |
| Convert point to nearest index *void | ConvertPointToNearestIndex (const PointType &point, IndexType &index) const |
| virtual LightObject::Pointer | CreateAnother () const |
| virtual void | DebugOff () const |
| virtual void | DebugOn () const |
| virtual void | Delete () |
| virtual OutputType | Evaluate (const InputType &input) const =0 |
| virtual bool | Evaluate (const PointType &point) const |
| virtual bool | EvaluateAtContinuousIndex (const ContinuousIndexType &index) const |
| virtual bool | EvaluateAtIndex (const IndexType &index) const |
| virtual double | EvaluateDistance (const PointType &point) const |
| virtual double | EvaluateDistanceAtIndex (const IndexType &index) const |
| Command * | GetCommand (unsigned long tag) |
| const CovarianceMatrixType & | GetCovariance () const |
| bool | GetDebug () const |
| virtual const ContinuousIndexType & | GetEndContinuousIndex () |
| virtual const IndexType & | GetEndIndex () |
| const InputImageType * | GetInputImage () const |
| const MeanVectorType & | GetMean () const |
| const MetaDataDictionary & | GetMetaDataDictionary (void) const |
| MetaDataDictionary & | GetMetaDataDictionary (void) |
| virtual unsigned long | GetMTime () const |
| virtual const char * | GetNameOfClass () const |
| virtual int | GetReferenceCount () const |
| virtual const ContinuousIndexType & | GetStartContinuousIndex () |
| virtual const IndexType & | GetStartIndex () |
| Get the lower threshold value *virtual const double & | GetThreshold () |
| bool | HasObserver (const EventObject &event) const |
| void | InvokeEvent (const EventObject &) const |
| void | InvokeEvent (const EventObject &) |
| Check if a point is inside the image buffer *warning For no validity checking of *the input image pointer is done *virtual bool | IsInsideBuffer (const PointType &point) const |
| Check if a continuous index is inside the image buffer *warning For no validity checking of *the input image is done *virtual bool | IsInsideBuffer (const ContinuousIndexType &index) const |
| Check if an index is inside the image buffer *warning For no validity checking of *the input image is done *virtual bool | IsInsideBuffer (const IndexType &index) const |
| itkStaticConstMacro (ImageDimension, unsigned int, TInputImage::ImageDimension) | |
| itkStaticConstMacro (ImageDimension, unsigned int, Superclass::ImageDimension) | |
| virtual void | Modified () const |
| void | Print (std::ostream &os, Indent indent=0) const |
| virtual void | Register () const |
| void | RemoveAllObservers () |
| void | RemoveObserver (unsigned long tag) |
| *Method to set covariance matrix this function calculates inverse covariance and pre factor of *MahalanobisDistance Distribution to speed up GetProbability *void | SetCovariance (const CovarianceMatrixType &cov) |
| void | SetDebug (bool debugFlag) const |
| virtual void | SetInputImage (const InputImageType *ptr) |
| Method to set mean *void | SetMean (const MeanVectorType &mean) |
| void | SetMetaDataDictionary (const MetaDataDictionary &rhs) |
| virtual void | SetReferenceCount (int) |
| virtual void | SetThreshold (double _arg) |
| virtual void | UnRegister () const |
Static Public Member Functions | |
| static void | BreakOnError () |
| static bool | GetGlobalWarningDisplay () |
| static void | GlobalWarningDisplayOff () |
| static void | GlobalWarningDisplayOn () |
| static Pointer | New () |
| This is a global flag that controls whether any warning *or error messages are displayed *static void | SetGlobalWarningDisplay (bool flag) |
Public Attributes | |
| Allow people to add remove invoke observers(callbacks) to any ITK *object.This is an implementation of the subject/observer design *pattern.An observer is added by specifying an event to respond to *and an itk unsigned lon | AddObserver )(const EventObject &event, Command *) const |
| *Method to set covariance matrix * | Also |
| This is a global flag that controls whether any | debug |
| Check if a point is inside the image buffer *warning For | efficiency |
| Check if a continuous index is inside the image buffer *warning For | efficiency |
| Check if an index is inside the image buffer *warning For | efficiency |
Protected Member Functions | |
| FunctionBase () | |
| ImageFunction () | |
| MahalanobisDistanceThresholdImageFunction () | |
| bool | PrintObservers (std::ostream &os, Indent indent) const |
| void | PrintSelf (std::ostream &os, Indent indent) const |
| virtual void | PrintTrailer (std::ostream &os, Indent indent) const |
| ~MahalanobisDistanceThresholdImageFunction () | |
Protected Attributes | |
| ContinuousIndexType | m_EndContinuousIndex |
| IndexType | m_EndIndex |
| InputImageConstPointer | m_Image |
| int | m_ReferenceCount |
| SimpleFastMutexLock | m_ReferenceCountLock |
| ContinuousIndexType | m_StartContinuousIndex |
| IndexType | m_StartIndex |
| Methods invoked by virtual Print() to print information about the object *including superclasses.Typically not called by the user(use Print()*instead) but used in the hierarchical print process to combine the *output of several classes.*/virtual void PrintSelf(std voi | PrintHeader )(std::ostream &os, Indent indent) const |
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Reimplemented from itk::ImageFunction< TInputImage, bool, TCoordRep >. Definition at line 55 of file itkMahalanobisDistanceThresholdImageFunction.h. |
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ContinuousIndex typedef support. Reimplemented from itk::ImageFunction< TInputImage, bool, TCoordRep >. Definition at line 79 of file itkMahalanobisDistanceThresholdImageFunction.h. |
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CoordRepType typedef support. Definition at line 94 of file itkImageFunction.h. |
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Type used to represent the Covariance matrix of the vector population Definition at line 82 of file itkMahalanobisDistanceThresholdImageFunction.h. |
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Index typedef support. Reimplemented from itk::ImageFunction< TInputImage, bool, TCoordRep >. Definition at line 76 of file itkMahalanobisDistanceThresholdImageFunction.h. |
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InputImagePointer typedef support Definition at line 88 of file itkImageFunction.h. |
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InputImageType typedef support. Reimplemented from itk::ImageFunction< TInputImage, bool, TCoordRep >. Definition at line 61 of file itkMahalanobisDistanceThresholdImageFunction.h. |
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InputPixel typedef support Definition at line 85 of file itkImageFunction.h. |
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Input type Definition at line 54 of file itkFunctionBase.h. |
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Type used to represent the Mean Vector of the vector population Definition at line 85 of file itkMahalanobisDistanceThresholdImageFunction.h. |
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OutputType typedef support. Reimplemented from itk::FunctionBase< Point< TCoordRep,::itk::GetImageDimension< TInputImage >::ImageDimension >, bool >. Reimplemented in itk::NeighborhoodBinaryThresholdImageFunction< TInputImage, TCoordRep >. Definition at line 91 of file itkImageFunction.h. |
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Typedef to describe the type of pixel. Definition at line 67 of file itkMahalanobisDistanceThresholdImageFunction.h. |
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Reimplemented from itk::ImageFunction< TInputImage, bool, TCoordRep >. Definition at line 54 of file itkMahalanobisDistanceThresholdImageFunction.h. |
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Point typedef support. Reimplemented from itk::ImageFunction< TInputImage, bool, TCoordRep >. Definition at line 73 of file itkMahalanobisDistanceThresholdImageFunction.h. |
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Standard class typedefs. Reimplemented from itk::ImageFunction< TInputImage, bool, TCoordRep >. Definition at line 52 of file itkMahalanobisDistanceThresholdImageFunction.h. |
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Reimplemented from itk::ImageFunction< TInputImage, bool, TCoordRep >. Definition at line 53 of file itkMahalanobisDistanceThresholdImageFunction.h. |
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Definition at line 155 of file itkMahalanobisDistanceThresholdImageFunction.h. |
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This method is called when itkExceptionMacro executes. It allows the debugger to break on error. |
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Definition at line 186 of file itkImageFunction.h. |
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Convert point to continuous index Definition at line 179 of file itkImageFunction.h. |
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Definition at line 169 of file itkImageFunction.h. |
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Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class. Reimplemented from itk::LightObject. |
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Turn debugging output off. |
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Turn debugging output on. |
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Delete an itk object. This method should always be used to delete an object when the new operator was used to create it. Using the C delete method will not work with reference counting. |
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Evaluate at the specified input position |
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BinaryThreshold the image at a point position Returns true if the image intensity at the specified point position satisfies the threshold criteria. The point is assumed to lie within the image buffer. ImageFunction::IsInsideBuffer() can be used to check bounds before calling the method. Implements itk::ImageFunction< TInputImage, bool, TCoordRep >. |
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BinaryThreshold the image at a continuous index position Returns true if the image intensity at the specified point position satisfies the threshold criteria. The point is assumed to lie within the image buffer. ImageFunction::IsInsideBuffer() can be used to check bounds before calling the method. Implements itk::ImageFunction< TInputImage, bool, TCoordRep >. |
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BinaryThreshold the image at an index position. Returns true if the image intensity at the specified point position satisfies the threshold criteria. The point is assumed to lie within the image buffer. ImageFunction::IsInsideBuffer() can be used to check bounds before calling the method. Implements itk::ImageFunction< TInputImage, bool, TCoordRep >. |
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Returns the actual value of the MahalanobisDistance at that point. The point is assumed to lie within the image buffer. ImageFunction::IsInsideBuffer() can be used to check bounds before calling the method. |
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Returns the actual value of the MahalanobisDistance at that Index. The point is assumed to lie within the image buffer. ImageFunction::IsInsideBuffer() can be used to check bounds before calling the method. |
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Definition at line 66 of file itkFunctionBase.h. |
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Get the command associated with the given tag. NOTE: This returns a pointer to a Command, but it is safe to asign this to a Command::Pointer. Since Command inherits from LightObject, at this point in the code, only a pointer or a reference to the Command can be used. |
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Get the value of the debug flag. |
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Get the input image. Definition at line 113 of file itkImageFunction.h. |
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Run-time type information (and related methods). Reimplemented from itk::ImageFunction< TInputImage, bool, TCoordRep >. |
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Gets the reference count on this object. Definition at line 98 of file itkLightObject.h. |
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Definition at line 100 of file itkObject.h. References itk::Object::SetGlobalWarningDisplay(). |
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Definition at line 98 of file itkObject.h. References itk::Object::SetGlobalWarningDisplay(). |
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Return true if an observer is registered for this event. |
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Call Execute on all the Commands observing this event id. The actions triggered by this call doesn't modify this object. |
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Call Execute on all the Commands observing this event id. |
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Definition at line 160 of file itkImageFunction.h. |
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Definition at line 146 of file itkImageFunction.h. |
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Definition at line 132 of file itkImageFunction.h. |
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Dimension underlying input image. |
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Dimension underlying input image. |
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Method for creation through the object factory. Reimplemented from itk::Object. |
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Cause the object to print itself out. |
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Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes. Reimplemented from itk::ImageFunction< TInputImage, bool, TCoordRep >. |
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Increase the reference count (mark as used by another object). Reimplemented from itk::LightObject. |
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Remove all observers . |
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Remove the observer with this tag value. |
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Set the value of the debug flag. A non-zero value turns debugging on. |
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Referenced by itk::Object::GlobalWarningDisplayOff(), and itk::Object::GlobalWarningDisplayOn(). |
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Set the input image.
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Sets the reference count (use with care) Reimplemented from itk::LightObject. |
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Decrease the reference count (release by another object). Reimplemented from itk::LightObject. |
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Definition at line 146 of file itkMahalanobisDistanceThresholdImageFunction.h. |
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Definition at line 94 of file itkObject.h. |
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Definition at line 158 of file itkImageFunction.h. |
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Definition at line 144 of file itkImageFunction.h. |
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Definition at line 130 of file itkImageFunction.h. |
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Definition at line 213 of file itkImageFunction.h. |
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Definition at line 211 of file itkImageFunction.h. |
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Const pointer to the input image. Definition at line 207 of file itkImageFunction.h. |
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Number of uses of this object by other objects. Definition at line 119 of file itkLightObject.h. |
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Mutex lock to protect modification to the reference count Definition at line 122 of file itkLightObject.h. |
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Definition at line 212 of file itkImageFunction.h. |
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Cache some values for testing if indices are inside buffered region. Definition at line 210 of file itkImageFunction.h. |
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1.4.2 written by Dimitri van Heesch,
© 1997-2000